Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
VTA1Q9NP79 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.29■□□□□ 0.84
VTA1Q9NP79 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
VTA1Q9NP79 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VTA1Q9NP79 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
VTA1Q9NP79 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
VTA1Q9NP79 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VTA1Q9NP79 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
VTA1Q9NP79 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
VTA1Q9NP79 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
VTA1Q9NP79 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
VTA1Q9NP79 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
VTA1Q9NP79 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
VTA1Q9NP79 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
VTA1Q9NP79 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
VTA1Q9NP79 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
VTA1Q9NP79 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
VTA1Q9NP79 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.28■□□□□ 0.84
VTA1Q9NP79 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
VTA1Q9NP79 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
VTA1Q9NP79 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
VTA1Q9NP79 SART3-203ENST00000546611 1184 ntBASIC20.28■□□□□ 0.84
VTA1Q9NP79 AC021087.4-201ENST00000563761 564 ntBASIC20.28■□□□□ 0.84
VTA1Q9NP79 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
VTA1Q9NP79 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
VTA1Q9NP79 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
VTA1Q9NP79 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
VTA1Q9NP79 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.28■□□□□ 0.84
VTA1Q9NP79 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
VTA1Q9NP79 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC20.28■□□□□ 0.84
VTA1Q9NP79 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
VTA1Q9NP79 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
VTA1Q9NP79 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
VTA1Q9NP79 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.28■□□□□ 0.84
VTA1Q9NP79 AC005082.1-201ENST00000413042 2259 ntBASIC20.28■□□□□ 0.84
VTA1Q9NP79 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.28■□□□□ 0.84
VTA1Q9NP79 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
VTA1Q9NP79 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC20.27■□□□□ 0.84
VTA1Q9NP79 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.27■□□□□ 0.84
VTA1Q9NP79 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
VTA1Q9NP79 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.27■□□□□ 0.84
VTA1Q9NP79 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
VTA1Q9NP79 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
VTA1Q9NP79 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.27■□□□□ 0.84
VTA1Q9NP79 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC20.27■□□□□ 0.84
VTA1Q9NP79 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
VTA1Q9NP79 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
VTA1Q9NP79 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC20.27■□□□□ 0.84
VTA1Q9NP79 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC20.27■□□□□ 0.84
VTA1Q9NP79 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC20.27■□□□□ 0.84
VTA1Q9NP79 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
VTA1Q9NP79 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC20.27■□□□□ 0.84
VTA1Q9NP79 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC20.27■□□□□ 0.84
VTA1Q9NP79 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.27■□□□□ 0.84
VTA1Q9NP79 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.27■□□□□ 0.84
VTA1Q9NP79 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
VTA1Q9NP79 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
VTA1Q9NP79 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC20.27■□□□□ 0.84
VTA1Q9NP79 AL356309.3-201ENST00000624132 1934 ntBASIC20.27■□□□□ 0.84
VTA1Q9NP79 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
VTA1Q9NP79 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC20.26■□□□□ 0.83
VTA1Q9NP79 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
VTA1Q9NP79 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
VTA1Q9NP79 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
VTA1Q9NP79 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VTA1Q9NP79 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VTA1Q9NP79 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC20.26■□□□□ 0.83
VTA1Q9NP79 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC20.26■□□□□ 0.83
VTA1Q9NP79 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VTA1Q9NP79 CD9-202ENST00000382515 1229 ntTSL 5 BASIC20.26■□□□□ 0.83
VTA1Q9NP79 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC20.26■□□□□ 0.83
VTA1Q9NP79 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC20.26■□□□□ 0.83
VTA1Q9NP79 RPL13AP23-201ENST00000480739 586 ntBASIC20.26■□□□□ 0.83
VTA1Q9NP79 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC20.26■□□□□ 0.83
VTA1Q9NP79 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VTA1Q9NP79 RPL18-209ENST00000550645 463 ntTSL 5 BASIC20.26■□□□□ 0.83
VTA1Q9NP79 RPL18-214ENST00000552588 559 ntTSL 3 BASIC20.26■□□□□ 0.83
VTA1Q9NP79 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC20.26■□□□□ 0.83
VTA1Q9NP79 PAM16-208ENST00000573553 722 ntTSL 2 BASIC20.26■□□□□ 0.83
VTA1Q9NP79 AC116407.3-201ENST00000623905 1129 ntBASIC20.26■□□□□ 0.83
VTA1Q9NP79 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
VTA1Q9NP79 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VTA1Q9NP79 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC20.26■□□□□ 0.83
VTA1Q9NP79 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VTA1Q9NP79 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC20.26■□□□□ 0.83
VTA1Q9NP79 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
VTA1Q9NP79 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
VTA1Q9NP79 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
VTA1Q9NP79 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
VTA1Q9NP79 AC097374.2-201ENST00000618617 1306 ntBASIC20.26■□□□□ 0.83
VTA1Q9NP79 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VTA1Q9NP79 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC20.25■□□□□ 0.83
VTA1Q9NP79 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.25■□□□□ 0.83
VTA1Q9NP79 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.25■□□□□ 0.83
VTA1Q9NP79 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.25■□□□□ 0.83
VTA1Q9NP79 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
VTA1Q9NP79 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
VTA1Q9NP79 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
VTA1Q9NP79 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
VTA1Q9NP79 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms