Protein–RNA interactions for Protein: Q9HCX3

ZNF304, Zinc finger protein 304, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF304Q9HCX3 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
ZNF304Q9HCX3 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
ZNF304Q9HCX3 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
ZNF304Q9HCX3 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF304Q9HCX3 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
ZNF304Q9HCX3 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF304Q9HCX3 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF304Q9HCX3 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF304Q9HCX3 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF304Q9HCX3 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF304Q9HCX3 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF304Q9HCX3 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF304Q9HCX3 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF304Q9HCX3 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF304Q9HCX3 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.25■□□□□ 0.35
ZNF304Q9HCX3 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.25■□□□□ 0.35
ZNF304Q9HCX3 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.25■□□□□ 0.35
ZNF304Q9HCX3 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.25■□□□□ 0.35
ZNF304Q9HCX3 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
ZNF304Q9HCX3 AP002414.4-201ENST00000589764 1148 ntBASIC17.25■□□□□ 0.35
ZNF304Q9HCX3 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.25■□□□□ 0.35
ZNF304Q9HCX3 IGHV3-41-201ENST00000613121 348 ntBASIC17.25■□□□□ 0.35
ZNF304Q9HCX3 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.25■□□□□ 0.35
ZNF304Q9HCX3 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF304Q9HCX3 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.25■□□□□ 0.35
ZNF304Q9HCX3 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF304Q9HCX3 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF304Q9HCX3 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
ZNF304Q9HCX3 AL353692.3-201ENST00000407031 1396 ntBASIC17.25■□□□□ 0.35
ZNF304Q9HCX3 AC018445.3-201ENST00000624177 1945 ntBASIC17.25■□□□□ 0.35
ZNF304Q9HCX3 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.25■□□□□ 0.35
ZNF304Q9HCX3 BX323043.1-201ENST00000641006 1765 ntBASIC17.25■□□□□ 0.35
ZNF304Q9HCX3 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF304Q9HCX3 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF304Q9HCX3 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
ZNF304Q9HCX3 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF304Q9HCX3 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF304Q9HCX3 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF304Q9HCX3 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
ZNF304Q9HCX3 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
ZNF304Q9HCX3 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
ZNF304Q9HCX3 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
ZNF304Q9HCX3 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF304Q9HCX3 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF304Q9HCX3 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF304Q9HCX3 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
ZNF304Q9HCX3 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF304Q9HCX3 AP002383.4-201ENST00000442518 975 ntBASIC17.24■□□□□ 0.35
ZNF304Q9HCX3 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.24■□□□□ 0.35
ZNF304Q9HCX3 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.24■□□□□ 0.35
ZNF304Q9HCX3 GUSBP12-201ENST00000513727 720 ntBASIC17.24■□□□□ 0.35
ZNF304Q9HCX3 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF304Q9HCX3 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.24■□□□□ 0.35
ZNF304Q9HCX3 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.24■□□□□ 0.35
ZNF304Q9HCX3 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
ZNF304Q9HCX3 AC087289.5-201ENST00000586076 3175 ntBASIC17.24■□□□□ 0.35
ZNF304Q9HCX3 AC005082.1-201ENST00000413042 2259 ntBASIC17.24■□□□□ 0.35
ZNF304Q9HCX3 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.24■□□□□ 0.35
ZNF304Q9HCX3 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.24■□□□□ 0.35
ZNF304Q9HCX3 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.24■□□□□ 0.35
ZNF304Q9HCX3 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF304Q9HCX3 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.24■□□□□ 0.35
ZNF304Q9HCX3 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.24■□□□□ 0.35
ZNF304Q9HCX3 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.23■□□□□ 0.35
ZNF304Q9HCX3 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF304Q9HCX3 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF304Q9HCX3 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
ZNF304Q9HCX3 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF304Q9HCX3 AL024508.2-201ENST00000607749 1894 ntBASIC17.23■□□□□ 0.35
ZNF304Q9HCX3 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF304Q9HCX3 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF304Q9HCX3 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF304Q9HCX3 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF304Q9HCX3 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF304Q9HCX3 AC113404.2-201ENST00000507884 177 ntBASIC17.23■□□□□ 0.35
ZNF304Q9HCX3 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.23■□□□□ 0.35
ZNF304Q9HCX3 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.23■□□□□ 0.35
ZNF304Q9HCX3 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.23■□□□□ 0.35
ZNF304Q9HCX3 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF304Q9HCX3 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF304Q9HCX3 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF304Q9HCX3 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF304Q9HCX3 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF304Q9HCX3 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.23■□□□□ 0.35
ZNF304Q9HCX3 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF304Q9HCX3 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
ZNF304Q9HCX3 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF304Q9HCX3 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF304Q9HCX3 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF304Q9HCX3 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF304Q9HCX3 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF304Q9HCX3 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF304Q9HCX3 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
ZNF304Q9HCX3 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF304Q9HCX3 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF304Q9HCX3 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF304Q9HCX3 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
ZNF304Q9HCX3 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
ZNF304Q9HCX3 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF304Q9HCX3 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms