Protein–RNA interactions for Protein: Q9H9Z2

LIN28A, Protein lin-28 homolog A, humanhuman

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28AQ9H9Z2 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
LIN28AQ9H9Z2 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LIN28AQ9H9Z2 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LIN28AQ9H9Z2 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LIN28AQ9H9Z2 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LIN28AQ9H9Z2 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LIN28AQ9H9Z2 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
LIN28AQ9H9Z2 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
LIN28AQ9H9Z2 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
LIN28AQ9H9Z2 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.52■□□□□ 0.4
LIN28AQ9H9Z2 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.52■□□□□ 0.4
LIN28AQ9H9Z2 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
LIN28AQ9H9Z2 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
LIN28AQ9H9Z2 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LIN28AQ9H9Z2 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
LIN28AQ9H9Z2 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
LIN28AQ9H9Z2 HMGA1P5-201ENST00000412453 271 ntBASIC17.52■□□□□ 0.4
LIN28AQ9H9Z2 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LIN28AQ9H9Z2 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.52■□□□□ 0.4
LIN28AQ9H9Z2 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.52■□□□□ 0.4
LIN28AQ9H9Z2 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
LIN28AQ9H9Z2 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LIN28AQ9H9Z2 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
LIN28AQ9H9Z2 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LIN28AQ9H9Z2 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.52■□□□□ 0.4
LIN28AQ9H9Z2 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LIN28AQ9H9Z2 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.52■□□□□ 0.39
LIN28AQ9H9Z2 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
LIN28AQ9H9Z2 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LIN28AQ9H9Z2 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
LIN28AQ9H9Z2 FEM1AP3-201ENST00000403722 1741 ntBASIC17.52■□□□□ 0.39
LIN28AQ9H9Z2 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LIN28AQ9H9Z2 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LIN28AQ9H9Z2 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
LIN28AQ9H9Z2 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
LIN28AQ9H9Z2 AC018695.7-201ENST00000624587 2492 ntBASIC17.52■□□□□ 0.39
LIN28AQ9H9Z2 AC073592.3-201ENST00000625118 1834 ntBASIC17.51■□□□□ 0.39
LIN28AQ9H9Z2 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
LIN28AQ9H9Z2 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LIN28AQ9H9Z2 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
LIN28AQ9H9Z2 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.51■□□□□ 0.39
LIN28AQ9H9Z2 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LIN28AQ9H9Z2 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
LIN28AQ9H9Z2 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LIN28AQ9H9Z2 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
LIN28AQ9H9Z2 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.51■□□□□ 0.39
LIN28AQ9H9Z2 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LIN28AQ9H9Z2 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
LIN28AQ9H9Z2 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LIN28AQ9H9Z2 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LIN28AQ9H9Z2 KRT8P45-201ENST00000414328 1447 ntBASIC17.51■□□□□ 0.39
LIN28AQ9H9Z2 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LIN28AQ9H9Z2 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.51■□□□□ 0.39
LIN28AQ9H9Z2 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.51■□□□□ 0.39
LIN28AQ9H9Z2 MIR4674-201ENST00000582457 87 ntBASIC17.51■□□□□ 0.39
LIN28AQ9H9Z2 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.51■□□□□ 0.39
LIN28AQ9H9Z2 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.51■□□□□ 0.39
LIN28AQ9H9Z2 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.51■□□□□ 0.39
LIN28AQ9H9Z2 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.51■□□□□ 0.39
LIN28AQ9H9Z2 AC092865.7-201ENST00000641832 219 ntBASIC17.51■□□□□ 0.39
LIN28AQ9H9Z2 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LIN28AQ9H9Z2 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LIN28AQ9H9Z2 AC046158.3-201ENST00000624947 2558 ntBASIC17.51■□□□□ 0.39
LIN28AQ9H9Z2 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LIN28AQ9H9Z2 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LIN28AQ9H9Z2 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LIN28AQ9H9Z2 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.51■□□□□ 0.39
LIN28AQ9H9Z2 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
LIN28AQ9H9Z2 HTR7P1-202ENST00000624664 4411 ntBASIC17.51■□□□□ 0.39
LIN28AQ9H9Z2 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
LIN28AQ9H9Z2 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LIN28AQ9H9Z2 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.51■□□□□ 0.39
LIN28AQ9H9Z2 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
LIN28AQ9H9Z2 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LIN28AQ9H9Z2 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LIN28AQ9H9Z2 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LIN28AQ9H9Z2 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.5■□□□□ 0.39
LIN28AQ9H9Z2 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LIN28AQ9H9Z2 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LIN28AQ9H9Z2 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LIN28AQ9H9Z2 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
LIN28AQ9H9Z2 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LIN28AQ9H9Z2 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LIN28AQ9H9Z2 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
LIN28AQ9H9Z2 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LIN28AQ9H9Z2 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LIN28AQ9H9Z2 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
LIN28AQ9H9Z2 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
LIN28AQ9H9Z2 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
LIN28AQ9H9Z2 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
LIN28AQ9H9Z2 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LIN28AQ9H9Z2 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LIN28AQ9H9Z2 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.5■□□□□ 0.39
LIN28AQ9H9Z2 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.5■□□□□ 0.39
LIN28AQ9H9Z2 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
LIN28AQ9H9Z2 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.5■□□□□ 0.39
LIN28AQ9H9Z2 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.5■□□□□ 0.39
LIN28AQ9H9Z2 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.5■□□□□ 0.39
LIN28AQ9H9Z2 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.5■□□□□ 0.39
LIN28AQ9H9Z2 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms