Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 AC005771.1-201ENST00000585581 349 ntBASIC20.25■□□□□ 0.83
RNF39Q9H2S5 AC128687.2-201ENST00000609657 566 ntBASIC20.25■□□□□ 0.83
RNF39Q9H2S5 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC20.25■□□□□ 0.83
RNF39Q9H2S5 AC068587.9-201ENST00000641814 219 ntBASIC20.25■□□□□ 0.83
RNF39Q9H2S5 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.25■□□□□ 0.83
RNF39Q9H2S5 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF39Q9H2S5 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RNF39Q9H2S5 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF39Q9H2S5 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF39Q9H2S5 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RNF39Q9H2S5 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RNF39Q9H2S5 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
RNF39Q9H2S5 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.25■□□□□ 0.83
RNF39Q9H2S5 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF39Q9H2S5 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF39Q9H2S5 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF39Q9H2S5 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
RNF39Q9H2S5 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF39Q9H2S5 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF39Q9H2S5 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC20.25■□□□□ 0.83
RNF39Q9H2S5 CBR3-AS1-204ENST00000453159 1499 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RNF39Q9H2S5 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.24■□□□□ 0.83
RNF39Q9H2S5 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF39Q9H2S5 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF39Q9H2S5 AL161938.1-201ENST00000569833 2180 ntBASIC20.24■□□□□ 0.83
RNF39Q9H2S5 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.24■□□□□ 0.83
RNF39Q9H2S5 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RNF39Q9H2S5 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.24■□□□□ 0.83
RNF39Q9H2S5 ATP5F1P6-201ENST00000402768 767 ntBASIC20.24■□□□□ 0.83
RNF39Q9H2S5 AC115285.1-201ENST00000424879 736 ntBASIC20.24■□□□□ 0.83
RNF39Q9H2S5 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RNF39Q9H2S5 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC20.24■□□□□ 0.83
RNF39Q9H2S5 RPS3AP53-201ENST00000454716 778 ntBASIC20.24■□□□□ 0.83
RNF39Q9H2S5 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC20.24■□□□□ 0.83
RNF39Q9H2S5 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC20.24■□□□□ 0.83
RNF39Q9H2S5 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.24■□□□□ 0.83
RNF39Q9H2S5 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC20.24■□□□□ 0.83
RNF39Q9H2S5 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC20.24■□□□□ 0.83
RNF39Q9H2S5 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC20.24■□□□□ 0.83
RNF39Q9H2S5 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC20.24■□□□□ 0.83
RNF39Q9H2S5 MEG8-208ENST00000553465 1176 ntTSL 5 BASIC20.24■□□□□ 0.83
RNF39Q9H2S5 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC20.24■□□□□ 0.83
RNF39Q9H2S5 AC006927.3-201ENST00000638789 384 ntBASIC20.24■□□□□ 0.83
RNF39Q9H2S5 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF39Q9H2S5 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.24■□□□□ 0.83
RNF39Q9H2S5 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RNF39Q9H2S5 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF39Q9H2S5 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.24■□□□□ 0.83
RNF39Q9H2S5 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF39Q9H2S5 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF39Q9H2S5 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RNF39Q9H2S5 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF39Q9H2S5 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.23■□□□□ 0.83
RNF39Q9H2S5 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RNF39Q9H2S5 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF39Q9H2S5 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF39Q9H2S5 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF39Q9H2S5 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.23■□□□□ 0.83
RNF39Q9H2S5 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF39Q9H2S5 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.23■□□□□ 0.83
RNF39Q9H2S5 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF39Q9H2S5 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF39Q9H2S5 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
RNF39Q9H2S5 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF39Q9H2S5 AL513475.2-201ENST00000402316 392 ntBASIC20.23■□□□□ 0.83
RNF39Q9H2S5 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RNF39Q9H2S5 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC20.23■□□□□ 0.83
RNF39Q9H2S5 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC20.23■□□□□ 0.83
RNF39Q9H2S5 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF39Q9H2S5 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC20.23■□□□□ 0.83
RNF39Q9H2S5 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC20.23■□□□□ 0.83
RNF39Q9H2S5 ZRANB2-AS2-205ENST00000455406 783 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RNF39Q9H2S5 KRT18P56-201ENST00000507275 550 ntBASIC20.23■□□□□ 0.83
RNF39Q9H2S5 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RNF39Q9H2S5 AC122713.1-201ENST00000518368 1015 ntBASIC20.23■□□□□ 0.83
RNF39Q9H2S5 AP003033.1-201ENST00000527244 415 ntBASIC20.23■□□□□ 0.83
RNF39Q9H2S5 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
RNF39Q9H2S5 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RNF39Q9H2S5 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC20.23■□□□□ 0.83
RNF39Q9H2S5 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC20.23■□□□□ 0.83
RNF39Q9H2S5 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF39Q9H2S5 AC112187.3-201ENST00000607844 408 ntBASIC20.23■□□□□ 0.83
RNF39Q9H2S5 AC005332.7-201ENST00000614046 2005 ntBASIC20.23■□□□□ 0.83
RNF39Q9H2S5 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.23■□□□□ 0.83
RNF39Q9H2S5 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC20.23■□□□□ 0.83
RNF39Q9H2S5 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.23■□□□□ 0.83
RNF39Q9H2S5 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF39Q9H2S5 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF39Q9H2S5 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF39Q9H2S5 AC006333.2-201ENST00000607957 2099 ntBASIC20.23■□□□□ 0.83
RNF39Q9H2S5 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF39Q9H2S5 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF39Q9H2S5 AC116562.4-201ENST00000641316 2276 ntBASIC20.23■□□□□ 0.83
RNF39Q9H2S5 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF39Q9H2S5 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.23■□□□□ 0.83
RNF39Q9H2S5 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
RNF39Q9H2S5 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
RNF39Q9H2S5 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF39Q9H2S5 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RNF39Q9H2S5 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms