Protein–RNA interactions for Protein: Q9H2L4

TMEM60, Transmembrane protein 60, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM60Q9H2L4 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.55■□□□□ 0.88
TMEM60Q9H2L4 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TMEM60Q9H2L4 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.55■□□□□ 0.88
TMEM60Q9H2L4 KRT89P-201ENST00000620027 1478 ntBASIC20.55■□□□□ 0.88
TMEM60Q9H2L4 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM60Q9H2L4 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC20.54■□□□□ 0.88
TMEM60Q9H2L4 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.54■□□□□ 0.88
TMEM60Q9H2L4 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM60Q9H2L4 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
TMEM60Q9H2L4 AC020763.4-201ENST00000623414 4170 ntBASIC20.54■□□□□ 0.88
TMEM60Q9H2L4 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM60Q9H2L4 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC20.54■□□□□ 0.88
TMEM60Q9H2L4 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM60Q9H2L4 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM60Q9H2L4 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM60Q9H2L4 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM60Q9H2L4 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
TMEM60Q9H2L4 KRT18P48-201ENST00000434763 852 ntBASIC20.54■□□□□ 0.88
TMEM60Q9H2L4 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC20.54■□□□□ 0.88
TMEM60Q9H2L4 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC20.54■□□□□ 0.88
TMEM60Q9H2L4 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC20.54■□□□□ 0.88
TMEM60Q9H2L4 AC004263.2-201ENST00000617183 678 ntBASIC20.54■□□□□ 0.88
TMEM60Q9H2L4 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.54■□□□□ 0.88
TMEM60Q9H2L4 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM60Q9H2L4 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM60Q9H2L4 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM60Q9H2L4 STK4-201ENST00000372801 2038 ntTSL 2 BASIC20.54■□□□□ 0.88
TMEM60Q9H2L4 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM60Q9H2L4 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM60Q9H2L4 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM60Q9H2L4 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM60Q9H2L4 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM60Q9H2L4 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM60Q9H2L4 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC20.53■□□□□ 0.88
TMEM60Q9H2L4 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM60Q9H2L4 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM60Q9H2L4 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM60Q9H2L4 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM60Q9H2L4 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM60Q9H2L4 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC20.53■□□□□ 0.88
TMEM60Q9H2L4 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
TMEM60Q9H2L4 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM60Q9H2L4 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM60Q9H2L4 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM60Q9H2L4 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM60Q9H2L4 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM60Q9H2L4 AC113404.2-201ENST00000507884 177 ntBASIC20.53■□□□□ 0.88
TMEM60Q9H2L4 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC20.53■□□□□ 0.88
TMEM60Q9H2L4 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC20.53■□□□□ 0.88
TMEM60Q9H2L4 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC20.53■□□□□ 0.88
TMEM60Q9H2L4 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC20.53■□□□□ 0.88
TMEM60Q9H2L4 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC20.53■□□□□ 0.88
TMEM60Q9H2L4 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM60Q9H2L4 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM60Q9H2L4 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC20.53■□□□□ 0.88
TMEM60Q9H2L4 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM60Q9H2L4 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM60Q9H2L4 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.53■□□□□ 0.88
TMEM60Q9H2L4 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM60Q9H2L4 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM60Q9H2L4 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM60Q9H2L4 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC20.53■□□□□ 0.88
TMEM60Q9H2L4 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM60Q9H2L4 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
TMEM60Q9H2L4 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM60Q9H2L4 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
TMEM60Q9H2L4 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM60Q9H2L4 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM60Q9H2L4 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.53■□□□□ 0.88
TMEM60Q9H2L4 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TMEM60Q9H2L4 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TMEM60Q9H2L4 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
TMEM60Q9H2L4 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TMEM60Q9H2L4 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TMEM60Q9H2L4 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TMEM60Q9H2L4 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TMEM60Q9H2L4 IGHGP-201ENST00000390555 1178 ntBASIC20.52■□□□□ 0.88
TMEM60Q9H2L4 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC20.52■□□□□ 0.88
TMEM60Q9H2L4 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TMEM60Q9H2L4 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC20.52■□□□□ 0.88
TMEM60Q9H2L4 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC20.52■□□□□ 0.88
TMEM60Q9H2L4 CLN6-204ENST00000564752 900 ntTSL 3 BASIC20.52■□□□□ 0.88
TMEM60Q9H2L4 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC20.52■□□□□ 0.88
TMEM60Q9H2L4 CLN6-214ENST00000636314 442 ntTSL 3 BASIC20.52■□□□□ 0.88
TMEM60Q9H2L4 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC20.52■□□□□ 0.88
TMEM60Q9H2L4 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
TMEM60Q9H2L4 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TMEM60Q9H2L4 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TMEM60Q9H2L4 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TMEM60Q9H2L4 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
TMEM60Q9H2L4 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TMEM60Q9H2L4 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TMEM60Q9H2L4 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TMEM60Q9H2L4 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TMEM60Q9H2L4 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
TMEM60Q9H2L4 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC20.51■□□□□ 0.87
TMEM60Q9H2L4 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TMEM60Q9H2L4 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TMEM60Q9H2L4 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TMEM60Q9H2L4 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms