Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 SDCCAG3P1-201ENST00000589292 1150 ntBASIC9.39□□□□□ -0.91
KRTAP4-1Q9BYQ7 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
KRTAP4-1Q9BYQ7 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
KRTAP4-1Q9BYQ7 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
KRTAP4-1Q9BYQ7 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
KRTAP4-1Q9BYQ7 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
KRTAP4-1Q9BYQ7 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC9.39□□□□□ -0.91
KRTAP4-1Q9BYQ7 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
KRTAP4-1Q9BYQ7 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
KRTAP4-1Q9BYQ7 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
KRTAP4-1Q9BYQ7 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
KRTAP4-1Q9BYQ7 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC9.39□□□□□ -0.91
KRTAP4-1Q9BYQ7 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
KRTAP4-1Q9BYQ7 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC9.39□□□□□ -0.91
KRTAP4-1Q9BYQ7 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
KRTAP4-1Q9BYQ7 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
KRTAP4-1Q9BYQ7 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
KRTAP4-1Q9BYQ7 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
KRTAP4-1Q9BYQ7 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC9.38□□□□□ -0.91
KRTAP4-1Q9BYQ7 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
KRTAP4-1Q9BYQ7 AC010460.3-201ENST00000511359 1579 ntBASIC9.38□□□□□ -0.91
KRTAP4-1Q9BYQ7 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC9.38□□□□□ -0.91
KRTAP4-1Q9BYQ7 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC9.38□□□□□ -0.91
KRTAP4-1Q9BYQ7 AC005332.7-201ENST00000614046 2005 ntBASIC9.38□□□□□ -0.91
KRTAP4-1Q9BYQ7 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
KRTAP4-1Q9BYQ7 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC9.38□□□□□ -0.91
KRTAP4-1Q9BYQ7 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
KRTAP4-1Q9BYQ7 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC9.38□□□□□ -0.91
KRTAP4-1Q9BYQ7 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC9.38□□□□□ -0.91
KRTAP4-1Q9BYQ7 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
KRTAP4-1Q9BYQ7 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
KRTAP4-1Q9BYQ7 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
KRTAP4-1Q9BYQ7 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC9.38□□□□□ -0.91
KRTAP4-1Q9BYQ7 CTNS-203ENST00000399306 803 ntTSL 3 BASIC9.38□□□□□ -0.91
KRTAP4-1Q9BYQ7 LBH-203ENST00000404397 543 ntTSL 4 BASIC9.38□□□□□ -0.91
KRTAP4-1Q9BYQ7 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
KRTAP4-1Q9BYQ7 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
KRTAP4-1Q9BYQ7 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC9.38□□□□□ -0.91
KRTAP4-1Q9BYQ7 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC9.38□□□□□ -0.91
KRTAP4-1Q9BYQ7 ALG1L5P-201ENST00000482043 771 ntBASIC9.38□□□□□ -0.91
KRTAP4-1Q9BYQ7 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
KRTAP4-1Q9BYQ7 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
KRTAP4-1Q9BYQ7 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC9.38□□□□□ -0.91
KRTAP4-1Q9BYQ7 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC9.38□□□□□ -0.91
KRTAP4-1Q9BYQ7 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC9.38□□□□□ -0.91
KRTAP4-1Q9BYQ7 AC064836.3-201ENST00000607928 673 ntBASIC9.38□□□□□ -0.91
KRTAP4-1Q9BYQ7 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC9.38□□□□□ -0.91
KRTAP4-1Q9BYQ7 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC9.38□□□□□ -0.91
KRTAP4-1Q9BYQ7 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC9.38□□□□□ -0.91
KRTAP4-1Q9BYQ7 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC9.38□□□□□ -0.91
KRTAP4-1Q9BYQ7 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
KRTAP4-1Q9BYQ7 AC092865.6-201ENST00000642101 219 ntBASIC9.38□□□□□ -0.91
KRTAP4-1Q9BYQ7 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
KRTAP4-1Q9BYQ7 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
KRTAP4-1Q9BYQ7 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
KRTAP4-1Q9BYQ7 COBL-210ENST00000632460 1941 ntTSL 5 BASIC9.38□□□□□ -0.91
KRTAP4-1Q9BYQ7 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
KRTAP4-1Q9BYQ7 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
KRTAP4-1Q9BYQ7 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
KRTAP4-1Q9BYQ7 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
KRTAP4-1Q9BYQ7 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
KRTAP4-1Q9BYQ7 AC073130.3-201ENST00000624389 2278 ntBASIC9.38□□□□□ -0.91
KRTAP4-1Q9BYQ7 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
KRTAP4-1Q9BYQ7 AC079776.2-201ENST00000641154 1609 ntBASIC9.38□□□□□ -0.91
KRTAP4-1Q9BYQ7 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC9.38□□□□□ -0.91
KRTAP4-1Q9BYQ7 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
KRTAP4-1Q9BYQ7 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
KRTAP4-1Q9BYQ7 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
KRTAP4-1Q9BYQ7 PMPCAP1-201ENST00000508114 1576 ntBASIC9.37□□□□□ -0.91
KRTAP4-1Q9BYQ7 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
KRTAP4-1Q9BYQ7 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
KRTAP4-1Q9BYQ7 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
KRTAP4-1Q9BYQ7 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC9.37□□□□□ -0.91
KRTAP4-1Q9BYQ7 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC9.37□□□□□ -0.91
KRTAP4-1Q9BYQ7 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
KRTAP4-1Q9BYQ7 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
KRTAP4-1Q9BYQ7 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
KRTAP4-1Q9BYQ7 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
KRTAP4-1Q9BYQ7 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
KRTAP4-1Q9BYQ7 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC9.37□□□□□ -0.91
KRTAP4-1Q9BYQ7 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
KRTAP4-1Q9BYQ7 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC9.37□□□□□ -0.91
KRTAP4-1Q9BYQ7 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC9.37□□□□□ -0.91
KRTAP4-1Q9BYQ7 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
KRTAP4-1Q9BYQ7 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC9.37□□□□□ -0.91
KRTAP4-1Q9BYQ7 HTR5BP-201ENST00000430851 1154 ntBASIC9.37□□□□□ -0.91
KRTAP4-1Q9BYQ7 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
KRTAP4-1Q9BYQ7 RNA5SP416-201ENST00000516838 111 ntBASIC9.37□□□□□ -0.91
KRTAP4-1Q9BYQ7 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC9.37□□□□□ -0.91
KRTAP4-1Q9BYQ7 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC9.37□□□□□ -0.91
KRTAP4-1Q9BYQ7 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC9.37□□□□□ -0.91
KRTAP4-1Q9BYQ7 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC9.37□□□□□ -0.91
KRTAP4-1Q9BYQ7 AC008687.5-201ENST00000593746 558 ntBASIC9.37□□□□□ -0.91
KRTAP4-1Q9BYQ7 AL596442.2-201ENST00000610240 980 ntBASIC9.37□□□□□ -0.91
KRTAP4-1Q9BYQ7 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
KRTAP4-1Q9BYQ7 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC9.37□□□□□ -0.91
KRTAP4-1Q9BYQ7 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
KRTAP4-1Q9BYQ7 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
KRTAP4-1Q9BYQ7 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
KRTAP4-1Q9BYQ7 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms