Protein–RNA interactions for Protein: Q9BSG5

RTBDN, Retbindin, humanhuman

Predicted RBP Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTBDNQ9BSG5 UROS-202ENST00000368778 1556 ntTSL 2 BASIC15.09■□□□□ 0.01
RTBDNQ9BSG5 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RTBDNQ9BSG5 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RTBDNQ9BSG5 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RTBDNQ9BSG5 CROCCP2-202ENST00000412962 2773 ntBASIC15.09■□□□□ 0.01
RTBDNQ9BSG5 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RTBDNQ9BSG5 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
RTBDNQ9BSG5 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RTBDNQ9BSG5 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
RTBDNQ9BSG5 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC15.09■□□□□ 0.01
RTBDNQ9BSG5 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
RTBDNQ9BSG5 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.09■□□□□ 0.01
RTBDNQ9BSG5 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.09■□□□□ 0.01
RTBDNQ9BSG5 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
RTBDNQ9BSG5 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC15.09■□□□□ 0.01
RTBDNQ9BSG5 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.08■□□□□ 0.01
RTBDNQ9BSG5 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.08■□□□□ 0.01
RTBDNQ9BSG5 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
RTBDNQ9BSG5 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
RTBDNQ9BSG5 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
RTBDNQ9BSG5 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
RTBDNQ9BSG5 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.08■□□□□ 0.01
RTBDNQ9BSG5 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.08■□□□□ 0.01
RTBDNQ9BSG5 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
RTBDNQ9BSG5 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
RTBDNQ9BSG5 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.08■□□□□ 0
RTBDNQ9BSG5 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.08■□□□□ 0
RTBDNQ9BSG5 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
RTBDNQ9BSG5 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.08■□□□□ 0
RTBDNQ9BSG5 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC15.08■□□□□ 0
RTBDNQ9BSG5 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC15.08■□□□□ 0
RTBDNQ9BSG5 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RTBDNQ9BSG5 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RTBDNQ9BSG5 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC15.08■□□□□ 0
RTBDNQ9BSG5 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC15.08■□□□□ 0
RTBDNQ9BSG5 AL023284.2-201ENST00000405850 579 ntBASIC15.08■□□□□ 0
RTBDNQ9BSG5 ELP6-205ENST00000439305 880 ntTSL 2 BASIC15.08■□□□□ 0
RTBDNQ9BSG5 PPP1R14BP5-201ENST00000440334 435 ntBASIC15.08■□□□□ 0
RTBDNQ9BSG5 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
RTBDNQ9BSG5 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC15.08■□□□□ 0
RTBDNQ9BSG5 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC15.08■□□□□ 0
RTBDNQ9BSG5 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC15.08■□□□□ 0
RTBDNQ9BSG5 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC15.08■□□□□ 0
RTBDNQ9BSG5 AL137784.2-201ENST00000607332 1000 ntBASIC15.08■□□□□ 0
RTBDNQ9BSG5 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RTBDNQ9BSG5 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC15.08■□□□□ 0
RTBDNQ9BSG5 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC15.08■□□□□ 0
RTBDNQ9BSG5 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RTBDNQ9BSG5 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
RTBDNQ9BSG5 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.08■□□□□ 0
RTBDNQ9BSG5 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
RTBDNQ9BSG5 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
RTBDNQ9BSG5 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC15.08■□□□□ 0
RTBDNQ9BSG5 AC009102.3-201ENST00000623118 1491 ntBASIC15.08■□□□□ 0
RTBDNQ9BSG5 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC15.07■□□□□ 0
RTBDNQ9BSG5 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
RTBDNQ9BSG5 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.07■□□□□ 0
RTBDNQ9BSG5 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.07■□□□□ 0
RTBDNQ9BSG5 AL163051.1-201ENST00000569214 1512 ntBASIC15.07■□□□□ 0
RTBDNQ9BSG5 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RTBDNQ9BSG5 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
RTBDNQ9BSG5 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RTBDNQ9BSG5 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.07■□□□□ 0
RTBDNQ9BSG5 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.07■□□□□ 0
RTBDNQ9BSG5 TBC1D3P2-202ENST00000577902 1649 ntBASIC15.07■□□□□ 0
RTBDNQ9BSG5 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.07■□□□□ 0
RTBDNQ9BSG5 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.07■□□□□ 0
RTBDNQ9BSG5 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.07■□□□□ 0
RTBDNQ9BSG5 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
RTBDNQ9BSG5 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
RTBDNQ9BSG5 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
RTBDNQ9BSG5 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC15.07■□□□□ 0
RTBDNQ9BSG5 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC15.07■□□□□ 0
RTBDNQ9BSG5 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC15.07■□□□□ 0
RTBDNQ9BSG5 NIFKP9-201ENST00000419265 221 ntBASIC15.07■□□□□ 0
RTBDNQ9BSG5 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC15.07■□□□□ 0
RTBDNQ9BSG5 AC008040.2-201ENST00000461049 708 ntBASIC15.07■□□□□ 0
RTBDNQ9BSG5 UNC93B5-201ENST00000530315 699 ntBASIC15.07■□□□□ 0
RTBDNQ9BSG5 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
RTBDNQ9BSG5 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC15.07■□□□□ 0
RTBDNQ9BSG5 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC15.07■□□□□ 0
RTBDNQ9BSG5 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC15.07■□□□□ 0
RTBDNQ9BSG5 ABBA01031674.1-201ENST00000635145 728 ntBASIC15.07■□□□□ 0
RTBDNQ9BSG5 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
RTBDNQ9BSG5 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RTBDNQ9BSG5 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.07■□□□□ 0
RTBDNQ9BSG5 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RTBDNQ9BSG5 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
RTBDNQ9BSG5 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
RTBDNQ9BSG5 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
RTBDNQ9BSG5 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.07■□□□□ 0
RTBDNQ9BSG5 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC15.07■□□□□ 0
RTBDNQ9BSG5 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.07■□□□□ 0
RTBDNQ9BSG5 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RTBDNQ9BSG5 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.06■□□□□ 0
RTBDNQ9BSG5 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RTBDNQ9BSG5 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC15.06■□□□□ 0
RTBDNQ9BSG5 AC133963.1-201ENST00000504166 1679 ntBASIC15.06■□□□□ 0
RTBDNQ9BSG5 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RTBDNQ9BSG5 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms