Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ARID3AQ99856 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ARID3AQ99856 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ARID3AQ99856 AP002982.1-201ENST00000492365 877 ntBASIC20.68■□□□□ 0.9
ARID3AQ99856 AC093827.2-201ENST00000512654 315 ntBASIC20.68■□□□□ 0.9
ARID3AQ99856 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ARID3AQ99856 AL353708.3-201ENST00000610272 989 ntBASIC20.68■□□□□ 0.9
ARID3AQ99856 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ARID3AQ99856 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
ARID3AQ99856 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.68■□□□□ 0.9
ARID3AQ99856 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ARID3AQ99856 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
ARID3AQ99856 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
ARID3AQ99856 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ARID3AQ99856 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
ARID3AQ99856 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ARID3AQ99856 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
ARID3AQ99856 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ARID3AQ99856 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ARID3AQ99856 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.68■□□□□ 0.9
ARID3AQ99856 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ARID3AQ99856 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ARID3AQ99856 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
ARID3AQ99856 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC20.67■□□□□ 0.9
ARID3AQ99856 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ARID3AQ99856 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ARID3AQ99856 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ARID3AQ99856 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ARID3AQ99856 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ARID3AQ99856 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC20.67■□□□□ 0.9
ARID3AQ99856 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
ARID3AQ99856 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ARID3AQ99856 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ARID3AQ99856 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ARID3AQ99856 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ARID3AQ99856 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ARID3AQ99856 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ARID3AQ99856 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ARID3AQ99856 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ARID3AQ99856 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.67■□□□□ 0.9
ARID3AQ99856 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.67■□□□□ 0.9
ARID3AQ99856 AL445675.2-201ENST00000620291 557 ntBASIC20.67■□□□□ 0.9
ARID3AQ99856 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ARID3AQ99856 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ARID3AQ99856 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.67■□□□□ 0.9
ARID3AQ99856 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ARID3AQ99856 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC20.67■□□□□ 0.9
ARID3AQ99856 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC20.67■□□□□ 0.9
ARID3AQ99856 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
ARID3AQ99856 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ARID3AQ99856 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
ARID3AQ99856 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ARID3AQ99856 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.67■□□□□ 0.9
ARID3AQ99856 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ARID3AQ99856 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC20.67■□□□□ 0.9
ARID3AQ99856 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ARID3AQ99856 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ARID3AQ99856 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ARID3AQ99856 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ARID3AQ99856 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ARID3AQ99856 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ARID3AQ99856 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC20.66■□□□□ 0.9
ARID3AQ99856 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
ARID3AQ99856 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ARID3AQ99856 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ARID3AQ99856 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
ARID3AQ99856 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
ARID3AQ99856 CES3-203ENST00000543856 3178 ntTSL 2 BASIC20.66■□□□□ 0.9
ARID3AQ99856 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ARID3AQ99856 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ARID3AQ99856 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
ARID3AQ99856 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.66■□□□□ 0.9
ARID3AQ99856 Z85996.1-201ENST00000494644 937 ntBASIC20.66■□□□□ 0.9
ARID3AQ99856 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.66■□□□□ 0.9
ARID3AQ99856 AL160286.2-201ENST00000567150 934 ntBASIC20.66■□□□□ 0.9
ARID3AQ99856 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.66■□□□□ 0.9
ARID3AQ99856 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.66■□□□□ 0.9
ARID3AQ99856 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.66■□□□□ 0.9
ARID3AQ99856 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.66■□□□□ 0.9
ARID3AQ99856 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.66■□□□□ 0.9
ARID3AQ99856 TSPY26P-202ENST00000565928 3884 ntBASIC20.66■□□□□ 0.9
ARID3AQ99856 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
ARID3AQ99856 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ARID3AQ99856 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ARID3AQ99856 PKD1P5-201ENST00000532415 10291 ntBASIC20.66■□□□□ 0.9
ARID3AQ99856 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ARID3AQ99856 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC20.66■□□□□ 0.9
ARID3AQ99856 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ARID3AQ99856 AC141586.5-201ENST00000624546 2050 ntBASIC20.66■□□□□ 0.9
ARID3AQ99856 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ARID3AQ99856 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ARID3AQ99856 LINC00554-201ENST00000564841 3011 ntBASIC20.66■□□□□ 0.9
ARID3AQ99856 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ARID3AQ99856 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ARID3AQ99856 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ARID3AQ99856 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ARID3AQ99856 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ARID3AQ99856 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
ARID3AQ99856 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ARID3AQ99856 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms