Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NPAS2Q99743 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NPAS2Q99743 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
NPAS2Q99743 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.82■□□□□ 0.44
NPAS2Q99743 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NPAS2Q99743 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NPAS2Q99743 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.82■□□□□ 0.44
NPAS2Q99743 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.82■□□□□ 0.44
NPAS2Q99743 MFAP1P1-201ENST00000442257 1255 ntBASIC17.82■□□□□ 0.44
NPAS2Q99743 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.82■□□□□ 0.44
NPAS2Q99743 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.82■□□□□ 0.44
NPAS2Q99743 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.82■□□□□ 0.44
NPAS2Q99743 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.82■□□□□ 0.44
NPAS2Q99743 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.82■□□□□ 0.44
NPAS2Q99743 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.82■□□□□ 0.44
NPAS2Q99743 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.82■□□□□ 0.44
NPAS2Q99743 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
NPAS2Q99743 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.82■□□□□ 0.44
NPAS2Q99743 AC005363.2-201ENST00000618631 242 ntBASIC17.82■□□□□ 0.44
NPAS2Q99743 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NPAS2Q99743 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NPAS2Q99743 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NPAS2Q99743 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
NPAS2Q99743 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NPAS2Q99743 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NPAS2Q99743 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.82■□□□□ 0.44
NPAS2Q99743 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.82■□□□□ 0.44
NPAS2Q99743 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
NPAS2Q99743 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
NPAS2Q99743 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
NPAS2Q99743 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NPAS2Q99743 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.82■□□□□ 0.44
NPAS2Q99743 PCDHA12-202ENST00000613593 2588 ntBASIC17.82■□□□□ 0.44
NPAS2Q99743 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.81■□□□□ 0.44
NPAS2Q99743 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
NPAS2Q99743 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
NPAS2Q99743 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NPAS2Q99743 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.81■□□□□ 0.44
NPAS2Q99743 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NPAS2Q99743 KRT18P22-201ENST00000402024 1347 ntBASIC17.81■□□□□ 0.44
NPAS2Q99743 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
NPAS2Q99743 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.81■□□□□ 0.44
NPAS2Q99743 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.81■□□□□ 0.44
NPAS2Q99743 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.81■□□□□ 0.44
NPAS2Q99743 TSPY14P-201ENST00000303979 915 ntBASIC17.81■□□□□ 0.44
NPAS2Q99743 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NPAS2Q99743 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.81■□□□□ 0.44
NPAS2Q99743 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.81■□□□□ 0.44
NPAS2Q99743 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
NPAS2Q99743 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NPAS2Q99743 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.81■□□□□ 0.44
NPAS2Q99743 AC010331.1-201ENST00000611423 582 ntBASIC17.81■□□□□ 0.44
NPAS2Q99743 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
NPAS2Q99743 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.81■□□□□ 0.44
NPAS2Q99743 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
NPAS2Q99743 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NPAS2Q99743 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
NPAS2Q99743 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
NPAS2Q99743 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.81■□□□□ 0.44
NPAS2Q99743 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
NPAS2Q99743 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.81■□□□□ 0.44
NPAS2Q99743 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NPAS2Q99743 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
NPAS2Q99743 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.8■□□□□ 0.44
NPAS2Q99743 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
NPAS2Q99743 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.8■□□□□ 0.44
NPAS2Q99743 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NPAS2Q99743 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.8■□□□□ 0.44
NPAS2Q99743 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NPAS2Q99743 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
NPAS2Q99743 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NPAS2Q99743 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NPAS2Q99743 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.8■□□□□ 0.44
NPAS2Q99743 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
NPAS2Q99743 AC113347.1-201ENST00000413321 391 ntBASIC17.8■□□□□ 0.44
NPAS2Q99743 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
NPAS2Q99743 TMPOP1-202ENST00000424642 1267 ntBASIC17.8■□□□□ 0.44
NPAS2Q99743 SLC25A3P1-201ENST00000443844 931 ntBASIC17.8■□□□□ 0.44
NPAS2Q99743 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.8■□□□□ 0.44
NPAS2Q99743 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.8■□□□□ 0.44
NPAS2Q99743 EGLN1P1-201ENST00000531623 762 ntBASIC17.8■□□□□ 0.44
NPAS2Q99743 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
NPAS2Q99743 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.8■□□□□ 0.44
NPAS2Q99743 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
NPAS2Q99743 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NPAS2Q99743 AC012317.2-201ENST00000623305 2251 ntBASIC17.8■□□□□ 0.44
NPAS2Q99743 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.8■□□□□ 0.44
NPAS2Q99743 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
NPAS2Q99743 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NPAS2Q99743 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NPAS2Q99743 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.8■□□□□ 0.44
NPAS2Q99743 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NPAS2Q99743 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NPAS2Q99743 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
NPAS2Q99743 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.8■□□□□ 0.44
NPAS2Q99743 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
NPAS2Q99743 AC073508.3-201ENST00000619697 1419 ntBASIC17.8■□□□□ 0.44
NPAS2Q99743 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
NPAS2Q99743 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NPAS2Q99743 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms