Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 CLN6-204ENST00000564752 900 ntTSL 3 BASIC15.24■□□□□ 0.03
CCL13Q99616 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC15.24■□□□□ 0.03
CCL13Q99616 SPEG-225ENST00000617028 815 ntTSL 5 BASIC15.24■□□□□ 0.03
CCL13Q99616 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CCL13Q99616 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCL13Q99616 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCL13Q99616 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC15.24■□□□□ 0.03
CCL13Q99616 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CCL13Q99616 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCL13Q99616 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCL13Q99616 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCL13Q99616 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
CCL13Q99616 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC15.24■□□□□ 0.03
CCL13Q99616 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCL13Q99616 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CCL13Q99616 EFTUD1P1-204ENST00000560401 1798 ntBASIC15.24■□□□□ 0.03
CCL13Q99616 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCL13Q99616 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL13Q99616 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL13Q99616 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC15.23■□□□□ 0.03
CCL13Q99616 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
CCL13Q99616 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC15.23■□□□□ 0.03
CCL13Q99616 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL13Q99616 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC15.23■□□□□ 0.03
CCL13Q99616 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL13Q99616 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCL13Q99616 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC15.23■□□□□ 0.03
CCL13Q99616 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL13Q99616 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
CCL13Q99616 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
CCL13Q99616 NEFHP1-201ENST00000412845 2629 ntBASIC15.23■□□□□ 0.03
CCL13Q99616 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CCL13Q99616 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL13Q99616 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC15.23■□□□□ 0.03
CCL13Q99616 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL13Q99616 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC15.23■□□□□ 0.03
CCL13Q99616 KRT18P48-201ENST00000434763 852 ntBASIC15.23■□□□□ 0.03
CCL13Q99616 CD320-202ENST00000537716 1119 ntTSL 2 BASIC15.23■□□□□ 0.03
CCL13Q99616 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC15.23■□□□□ 0.03
CCL13Q99616 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC15.23■□□□□ 0.03
CCL13Q99616 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCL13Q99616 CLN6-214ENST00000636314 442 ntTSL 3 BASIC15.23■□□□□ 0.03
CCL13Q99616 OR6D1P-202ENST00000641007 5290 ntBASIC15.23■□□□□ 0.03
CCL13Q99616 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL13Q99616 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL13Q99616 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL13Q99616 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL13Q99616 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
CCL13Q99616 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC15.23■□□□□ 0.03
CCL13Q99616 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL13Q99616 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CCL13Q99616 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL13Q99616 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL13Q99616 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL13Q99616 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCL13Q99616 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCL13Q99616 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCL13Q99616 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCL13Q99616 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CCL13Q99616 MADD-208ENST00000405573 1823 ntTSL 5 BASIC15.22■□□□□ 0.03
CCL13Q99616 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CCL13Q99616 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCL13Q99616 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCL13Q99616 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCL13Q99616 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCL13Q99616 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCL13Q99616 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCL13Q99616 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCL13Q99616 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCL13Q99616 DAP-202ENST00000432074 1048 ntTSL 2 BASIC15.22■□□□□ 0.03
CCL13Q99616 SPDYE13P-201ENST00000445314 798 ntBASIC15.22■□□□□ 0.03
CCL13Q99616 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC15.22■□□□□ 0.03
CCL13Q99616 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC15.22■□□□□ 0.03
CCL13Q99616 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC15.22■□□□□ 0.03
CCL13Q99616 LITAF-220ENST00000620789 692 ntTSL 5 BASIC15.22■□□□□ 0.03
CCL13Q99616 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC15.22■□□□□ 0.03
CCL13Q99616 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCL13Q99616 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC15.22■□□□□ 0.03
CCL13Q99616 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCL13Q99616 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCL13Q99616 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCL13Q99616 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCL13Q99616 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCL13Q99616 COMP-202ENST00000425807 2292 ntTSL 2 BASIC15.22■□□□□ 0.03
CCL13Q99616 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC15.22■□□□□ 0.03
CCL13Q99616 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCL13Q99616 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCL13Q99616 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CCL13Q99616 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CCL13Q99616 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCL13Q99616 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCL13Q99616 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC15.21■□□□□ 0.03
CCL13Q99616 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
CCL13Q99616 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCL13Q99616 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCL13Q99616 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
CCL13Q99616 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCL13Q99616 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CCL13Q99616 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC15.21■□□□□ 0.03
CCL13Q99616 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms