Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
PKP4Q99569 HBZP1-201ENST00000354915 429 ntBASIC17.71■□□□□ 0.43
PKP4Q99569 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PKP4Q99569 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PKP4Q99569 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PKP4Q99569 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.71■□□□□ 0.43
PKP4Q99569 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.71■□□□□ 0.43
PKP4Q99569 AC024563.2-201ENST00000603282 481 ntBASIC17.71■□□□□ 0.43
PKP4Q99569 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
PKP4Q99569 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PKP4Q99569 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.71■□□□□ 0.43
PKP4Q99569 LINC01311-201ENST00000565162 1445 ntBASIC17.71■□□□□ 0.43
PKP4Q99569 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PKP4Q99569 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PKP4Q99569 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PKP4Q99569 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.71■□□□□ 0.42
PKP4Q99569 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PKP4Q99569 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
PKP4Q99569 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PKP4Q99569 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PKP4Q99569 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PKP4Q99569 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
PKP4Q99569 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
PKP4Q99569 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PKP4Q99569 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PKP4Q99569 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PKP4Q99569 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PKP4Q99569 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PKP4Q99569 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PKP4Q99569 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PKP4Q99569 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.7■□□□□ 0.42
PKP4Q99569 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PKP4Q99569 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.7■□□□□ 0.42
PKP4Q99569 LINC01238-205ENST00000567549 1107 ntBASIC17.7■□□□□ 0.42
PKP4Q99569 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
PKP4Q99569 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PKP4Q99569 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
PKP4Q99569 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PKP4Q99569 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PKP4Q99569 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PKP4Q99569 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
PKP4Q99569 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.7■□□□□ 0.42
PKP4Q99569 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PKP4Q99569 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.7■□□□□ 0.42
PKP4Q99569 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
PKP4Q99569 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PKP4Q99569 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PKP4Q99569 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PKP4Q99569 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
PKP4Q99569 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
PKP4Q99569 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PKP4Q99569 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.7■□□□□ 0.42
PKP4Q99569 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PKP4Q99569 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.69■□□□□ 0.42
PKP4Q99569 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PKP4Q99569 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.69■□□□□ 0.42
PKP4Q99569 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.69■□□□□ 0.42
PKP4Q99569 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PKP4Q99569 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.69■□□□□ 0.42
PKP4Q99569 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
PKP4Q99569 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PKP4Q99569 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PKP4Q99569 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PKP4Q99569 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
PKP4Q99569 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.69■□□□□ 0.42
PKP4Q99569 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.69■□□□□ 0.42
PKP4Q99569 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.69■□□□□ 0.42
PKP4Q99569 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.69■□□□□ 0.42
PKP4Q99569 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.69■□□□□ 0.42
PKP4Q99569 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.69■□□□□ 0.42
PKP4Q99569 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.69■□□□□ 0.42
PKP4Q99569 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PKP4Q99569 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
PKP4Q99569 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PKP4Q99569 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.69■□□□□ 0.42
PKP4Q99569 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.69■□□□□ 0.42
PKP4Q99569 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PKP4Q99569 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.69■□□□□ 0.42
PKP4Q99569 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PKP4Q99569 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PKP4Q99569 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.69■□□□□ 0.42
PKP4Q99569 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.69■□□□□ 0.42
PKP4Q99569 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
PKP4Q99569 AC093010.1-201ENST00000473625 1624 ntBASIC17.69■□□□□ 0.42
PKP4Q99569 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PKP4Q99569 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.68■□□□□ 0.42
PKP4Q99569 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PKP4Q99569 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PKP4Q99569 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.68■□□□□ 0.42
PKP4Q99569 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
PKP4Q99569 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PKP4Q99569 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PKP4Q99569 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PKP4Q99569 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PKP4Q99569 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.68■□□□□ 0.42
PKP4Q99569 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PKP4Q99569 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.68■□□□□ 0.42
PKP4Q99569 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PKP4Q99569 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PKP4Q99569 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms