Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
CDK5RAP1Q96SZ6 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
CDK5RAP1Q96SZ6 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDK5RAP1Q96SZ6 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.83■□□□□ 0.61
CDK5RAP1Q96SZ6 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDK5RAP1Q96SZ6 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.83■□□□□ 0.61
CDK5RAP1Q96SZ6 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CDK5RAP1Q96SZ6 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDK5RAP1Q96SZ6 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDK5RAP1Q96SZ6 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDK5RAP1Q96SZ6 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CDK5RAP1Q96SZ6 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.83■□□□□ 0.6
CDK5RAP1Q96SZ6 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDK5RAP1Q96SZ6 AC074051.2-201ENST00000565115 352 ntBASIC18.83■□□□□ 0.6
CDK5RAP1Q96SZ6 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.83■□□□□ 0.6
CDK5RAP1Q96SZ6 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CDK5RAP1Q96SZ6 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.83■□□□□ 0.6
CDK5RAP1Q96SZ6 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CDK5RAP1Q96SZ6 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDK5RAP1Q96SZ6 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CDK5RAP1Q96SZ6 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDK5RAP1Q96SZ6 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CDK5RAP1Q96SZ6 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDK5RAP1Q96SZ6 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDK5RAP1Q96SZ6 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDK5RAP1Q96SZ6 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
CDK5RAP1Q96SZ6 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDK5RAP1Q96SZ6 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDK5RAP1Q96SZ6 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.82■□□□□ 0.6
CDK5RAP1Q96SZ6 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.82■□□□□ 0.6
CDK5RAP1Q96SZ6 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CDK5RAP1Q96SZ6 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CDK5RAP1Q96SZ6 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CDK5RAP1Q96SZ6 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
CDK5RAP1Q96SZ6 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CDK5RAP1Q96SZ6 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.82■□□□□ 0.6
CDK5RAP1Q96SZ6 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CDK5RAP1Q96SZ6 DUSP5P1-201ENST00000441325 1139 ntBASIC18.82■□□□□ 0.6
CDK5RAP1Q96SZ6 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.82■□□□□ 0.6
CDK5RAP1Q96SZ6 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
CDK5RAP1Q96SZ6 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.82■□□□□ 0.6
CDK5RAP1Q96SZ6 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDK5RAP1Q96SZ6 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.82■□□□□ 0.6
CDK5RAP1Q96SZ6 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDK5RAP1Q96SZ6 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDK5RAP1Q96SZ6 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.82■□□□□ 0.6
CDK5RAP1Q96SZ6 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CDK5RAP1Q96SZ6 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDK5RAP1Q96SZ6 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.82■□□□□ 0.6
CDK5RAP1Q96SZ6 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.82■□□□□ 0.6
CDK5RAP1Q96SZ6 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDK5RAP1Q96SZ6 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CDK5RAP1Q96SZ6 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDK5RAP1Q96SZ6 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CDK5RAP1Q96SZ6 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDK5RAP1Q96SZ6 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDK5RAP1Q96SZ6 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.82■□□□□ 0.6
CDK5RAP1Q96SZ6 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CDK5RAP1Q96SZ6 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDK5RAP1Q96SZ6 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDK5RAP1Q96SZ6 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CDK5RAP1Q96SZ6 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDK5RAP1Q96SZ6 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDK5RAP1Q96SZ6 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDK5RAP1Q96SZ6 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CDK5RAP1Q96SZ6 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.81■□□□□ 0.6
CDK5RAP1Q96SZ6 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDK5RAP1Q96SZ6 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CDK5RAP1Q96SZ6 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDK5RAP1Q96SZ6 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CDK5RAP1Q96SZ6 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDK5RAP1Q96SZ6 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CDK5RAP1Q96SZ6 AL450487.1-201ENST00000426799 995 ntBASIC18.81■□□□□ 0.6
CDK5RAP1Q96SZ6 MTCL1P1-201ENST00000446207 792 ntBASIC18.81■□□□□ 0.6
CDK5RAP1Q96SZ6 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CDK5RAP1Q96SZ6 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.81■□□□□ 0.6
CDK5RAP1Q96SZ6 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.81■□□□□ 0.6
CDK5RAP1Q96SZ6 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.81■□□□□ 0.6
CDK5RAP1Q96SZ6 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.81■□□□□ 0.6
CDK5RAP1Q96SZ6 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.81■□□□□ 0.6
CDK5RAP1Q96SZ6 AL121772.3-201ENST00000610840 674 ntBASIC18.81■□□□□ 0.6
CDK5RAP1Q96SZ6 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDK5RAP1Q96SZ6 AL691432.3-201ENST00000621860 400 ntBASIC18.81■□□□□ 0.6
CDK5RAP1Q96SZ6 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.81■□□□□ 0.6
CDK5RAP1Q96SZ6 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.81■□□□□ 0.6
CDK5RAP1Q96SZ6 AC093010.1-201ENST00000473625 1624 ntBASIC18.81■□□□□ 0.6
CDK5RAP1Q96SZ6 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CDK5RAP1Q96SZ6 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.81■□□□□ 0.6
CDK5RAP1Q96SZ6 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
CDK5RAP1Q96SZ6 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDK5RAP1Q96SZ6 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDK5RAP1Q96SZ6 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.8■□□□□ 0.6
CDK5RAP1Q96SZ6 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDK5RAP1Q96SZ6 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDK5RAP1Q96SZ6 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDK5RAP1Q96SZ6 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.8■□□□□ 0.6
CDK5RAP1Q96SZ6 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDK5RAP1Q96SZ6 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDK5RAP1Q96SZ6 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.8■□□□□ 0.6
CDK5RAP1Q96SZ6 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms