Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
RPRD1AQ96P16 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RPRD1AQ96P16 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
RPRD1AQ96P16 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RPRD1AQ96P16 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RPRD1AQ96P16 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.72■□□□□ 0.59
RPRD1AQ96P16 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.72■□□□□ 0.59
RPRD1AQ96P16 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.72■□□□□ 0.59
RPRD1AQ96P16 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.72■□□□□ 0.59
RPRD1AQ96P16 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.72■□□□□ 0.59
RPRD1AQ96P16 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RPRD1AQ96P16 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RPRD1AQ96P16 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RPRD1AQ96P16 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.72■□□□□ 0.59
RPRD1AQ96P16 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RPRD1AQ96P16 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.72■□□□□ 0.59
RPRD1AQ96P16 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RPRD1AQ96P16 AL020996.1-203ENST00000536896 2307 ntBASIC18.72■□□□□ 0.59
RPRD1AQ96P16 LINC00602-201ENST00000629776 2065 ntBASIC18.72■□□□□ 0.59
RPRD1AQ96P16 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.72■□□□□ 0.59
RPRD1AQ96P16 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RPRD1AQ96P16 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
RPRD1AQ96P16 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RPRD1AQ96P16 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.71■□□□□ 0.59
RPRD1AQ96P16 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPRD1AQ96P16 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.71■□□□□ 0.59
RPRD1AQ96P16 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.71■□□□□ 0.59
RPRD1AQ96P16 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPRD1AQ96P16 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPRD1AQ96P16 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.71■□□□□ 0.59
RPRD1AQ96P16 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPRD1AQ96P16 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPRD1AQ96P16 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RPRD1AQ96P16 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPRD1AQ96P16 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.71■□□□□ 0.59
RPRD1AQ96P16 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPRD1AQ96P16 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPRD1AQ96P16 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.71■□□□□ 0.59
RPRD1AQ96P16 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.71■□□□□ 0.59
RPRD1AQ96P16 CHCHD2P8-201ENST00000429873 447 ntBASIC18.71■□□□□ 0.59
RPRD1AQ96P16 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.71■□□□□ 0.59
RPRD1AQ96P16 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.71■□□□□ 0.59
RPRD1AQ96P16 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.71■□□□□ 0.59
RPRD1AQ96P16 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RPRD1AQ96P16 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
RPRD1AQ96P16 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RPRD1AQ96P16 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPRD1AQ96P16 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RPRD1AQ96P16 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.71■□□□□ 0.59
RPRD1AQ96P16 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPRD1AQ96P16 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPRD1AQ96P16 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RPRD1AQ96P16 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.71■□□□□ 0.58
RPRD1AQ96P16 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
RPRD1AQ96P16 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPRD1AQ96P16 PHGDH-209ENST00000641074 1780 ntBASIC18.7■□□□□ 0.58
RPRD1AQ96P16 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
RPRD1AQ96P16 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPRD1AQ96P16 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPRD1AQ96P16 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPRD1AQ96P16 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RPRD1AQ96P16 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RPRD1AQ96P16 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
RPRD1AQ96P16 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.7■□□□□ 0.58
RPRD1AQ96P16 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.7■□□□□ 0.58
RPRD1AQ96P16 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPRD1AQ96P16 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.7■□□□□ 0.58
RPRD1AQ96P16 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.7■□□□□ 0.58
RPRD1AQ96P16 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.7■□□□□ 0.58
RPRD1AQ96P16 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.7■□□□□ 0.58
RPRD1AQ96P16 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
RPRD1AQ96P16 IGHV3-41-201ENST00000613121 348 ntBASIC18.7■□□□□ 0.58
RPRD1AQ96P16 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.7■□□□□ 0.58
RPRD1AQ96P16 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPRD1AQ96P16 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.7■□□□□ 0.58
RPRD1AQ96P16 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.7■□□□□ 0.58
RPRD1AQ96P16 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.7■□□□□ 0.58
RPRD1AQ96P16 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPRD1AQ96P16 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RPRD1AQ96P16 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPRD1AQ96P16 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPRD1AQ96P16 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
RPRD1AQ96P16 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
RPRD1AQ96P16 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPRD1AQ96P16 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.69■□□□□ 0.58
RPRD1AQ96P16 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPRD1AQ96P16 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.69■□□□□ 0.58
RPRD1AQ96P16 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.69■□□□□ 0.58
RPRD1AQ96P16 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.69■□□□□ 0.58
RPRD1AQ96P16 AC090616.6-201ENST00000582640 721 ntBASIC18.69■□□□□ 0.58
RPRD1AQ96P16 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
RPRD1AQ96P16 AC135776.1-201ENST00000319817 2481 ntBASIC18.69■□□□□ 0.58
RPRD1AQ96P16 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.69■□□□□ 0.58
RPRD1AQ96P16 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPRD1AQ96P16 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.69■□□□□ 0.58
RPRD1AQ96P16 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RPRD1AQ96P16 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RPRD1AQ96P16 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RPRD1AQ96P16 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.69■□□□□ 0.58
RPRD1AQ96P16 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms