Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SH3KBP1Q96B97 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SH3KBP1Q96B97 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SH3KBP1Q96B97 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.03■□□□□ 0.48
SH3KBP1Q96B97 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.03■□□□□ 0.48
SH3KBP1Q96B97 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SH3KBP1Q96B97 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SH3KBP1Q96B97 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.02■□□□□ 0.48
SH3KBP1Q96B97 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SH3KBP1Q96B97 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SH3KBP1Q96B97 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.02■□□□□ 0.48
SH3KBP1Q96B97 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SH3KBP1Q96B97 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SH3KBP1Q96B97 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SH3KBP1Q96B97 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SH3KBP1Q96B97 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SH3KBP1Q96B97 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SH3KBP1Q96B97 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SH3KBP1Q96B97 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SH3KBP1Q96B97 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.02■□□□□ 0.48
SH3KBP1Q96B97 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.02■□□□□ 0.48
SH3KBP1Q96B97 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.02■□□□□ 0.48
SH3KBP1Q96B97 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.02■□□□□ 0.48
SH3KBP1Q96B97 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.02■□□□□ 0.48
SH3KBP1Q96B97 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.02■□□□□ 0.48
SH3KBP1Q96B97 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.02■□□□□ 0.48
SH3KBP1Q96B97 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SH3KBP1Q96B97 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SH3KBP1Q96B97 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.47
SH3KBP1Q96B97 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
SH3KBP1Q96B97 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
SH3KBP1Q96B97 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
SH3KBP1Q96B97 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SH3KBP1Q96B97 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SH3KBP1Q96B97 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.01■□□□□ 0.47
SH3KBP1Q96B97 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SH3KBP1Q96B97 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.01■□□□□ 0.47
SH3KBP1Q96B97 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
SH3KBP1Q96B97 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
SH3KBP1Q96B97 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SH3KBP1Q96B97 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SH3KBP1Q96B97 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.01■□□□□ 0.47
SH3KBP1Q96B97 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SH3KBP1Q96B97 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.01■□□□□ 0.47
SH3KBP1Q96B97 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SH3KBP1Q96B97 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.01■□□□□ 0.47
SH3KBP1Q96B97 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.01■□□□□ 0.47
SH3KBP1Q96B97 HLA-F-220ENST00000434407 884 ntBASIC18.01■□□□□ 0.47
SH3KBP1Q96B97 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
SH3KBP1Q96B97 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.01■□□□□ 0.47
SH3KBP1Q96B97 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
SH3KBP1Q96B97 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.01■□□□□ 0.47
SH3KBP1Q96B97 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.01■□□□□ 0.47
SH3KBP1Q96B97 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.01■□□□□ 0.47
SH3KBP1Q96B97 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
SH3KBP1Q96B97 AC093458.2-201ENST00000623150 629 ntBASIC18.01■□□□□ 0.47
SH3KBP1Q96B97 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.01■□□□□ 0.47
SH3KBP1Q96B97 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SH3KBP1Q96B97 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SH3KBP1Q96B97 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.01■□□□□ 0.47
SH3KBP1Q96B97 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.01■□□□□ 0.47
SH3KBP1Q96B97 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SH3KBP1Q96B97 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SH3KBP1Q96B97 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
SH3KBP1Q96B97 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SH3KBP1Q96B97 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SH3KBP1Q96B97 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.01■□□□□ 0.47
SH3KBP1Q96B97 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
SH3KBP1Q96B97 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SH3KBP1Q96B97 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SH3KBP1Q96B97 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SH3KBP1Q96B97 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
SH3KBP1Q96B97 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18■□□□□ 0.47
SH3KBP1Q96B97 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
SH3KBP1Q96B97 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18■□□□□ 0.47
SH3KBP1Q96B97 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18■□□□□ 0.47
SH3KBP1Q96B97 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SH3KBP1Q96B97 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18■□□□□ 0.47
SH3KBP1Q96B97 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SH3KBP1Q96B97 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SH3KBP1Q96B97 CYP51A1P1-201ENST00000492267 1507 ntBASIC18■□□□□ 0.47
SH3KBP1Q96B97 AL391807.1-203ENST00000604392 2365 ntBASIC18■□□□□ 0.47
SH3KBP1Q96B97 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
SH3KBP1Q96B97 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
SH3KBP1Q96B97 SPDYE13P-201ENST00000445314 798 ntBASIC18■□□□□ 0.47
SH3KBP1Q96B97 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18■□□□□ 0.47
SH3KBP1Q96B97 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SH3KBP1Q96B97 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18■□□□□ 0.47
SH3KBP1Q96B97 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18■□□□□ 0.47
SH3KBP1Q96B97 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18■□□□□ 0.47
SH3KBP1Q96B97 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SH3KBP1Q96B97 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SH3KBP1Q96B97 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18■□□□□ 0.47
SH3KBP1Q96B97 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
SH3KBP1Q96B97 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18■□□□□ 0.47
SH3KBP1Q96B97 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SH3KBP1Q96B97 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
SH3KBP1Q96B97 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
SH3KBP1Q96B97 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18■□□□□ 0.47
SH3KBP1Q96B97 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms