Protein–RNA interactions for Protein: Q92623

TTC9, Tetratricopeptide repeat protein 9A, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9Q92623 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TTC9Q92623 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.3■□□□□ 0.36
TTC9Q92623 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.3■□□□□ 0.36
TTC9Q92623 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.3■□□□□ 0.36
TTC9Q92623 FAM197Y8-203ENST00000450145 560 ntBASIC17.3■□□□□ 0.36
TTC9Q92623 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
TTC9Q92623 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.3■□□□□ 0.36
TTC9Q92623 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.3■□□□□ 0.36
TTC9Q92623 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.3■□□□□ 0.36
TTC9Q92623 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.3■□□□□ 0.36
TTC9Q92623 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.3■□□□□ 0.36
TTC9Q92623 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TTC9Q92623 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TTC9Q92623 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TTC9Q92623 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TTC9Q92623 KRT8P32-201ENST00000512863 1461 ntBASIC17.3■□□□□ 0.36
TTC9Q92623 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.3■□□□□ 0.36
TTC9Q92623 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TTC9Q92623 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TTC9Q92623 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TTC9Q92623 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TTC9Q92623 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TTC9Q92623 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TTC9Q92623 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.29■□□□□ 0.36
TTC9Q92623 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.29■□□□□ 0.36
TTC9Q92623 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.29■□□□□ 0.36
TTC9Q92623 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TTC9Q92623 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TTC9Q92623 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TTC9Q92623 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TTC9Q92623 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TTC9Q92623 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TTC9Q92623 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TTC9Q92623 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TTC9Q92623 AC005104.2-201ENST00000427818 678 ntBASIC17.29■□□□□ 0.36
TTC9Q92623 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.29■□□□□ 0.36
TTC9Q92623 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TTC9Q92623 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.29■□□□□ 0.36
TTC9Q92623 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.29■□□□□ 0.36
TTC9Q92623 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.29■□□□□ 0.36
TTC9Q92623 TERC-201ENST00000602385 541 ntBASIC17.29■□□□□ 0.36
TTC9Q92623 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.29■□□□□ 0.36
TTC9Q92623 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
TTC9Q92623 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TTC9Q92623 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TTC9Q92623 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TTC9Q92623 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.29■□□□□ 0.36
TTC9Q92623 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TTC9Q92623 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TTC9Q92623 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TTC9Q92623 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TTC9Q92623 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TTC9Q92623 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TTC9Q92623 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TTC9Q92623 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TTC9Q92623 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TTC9Q92623 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TTC9Q92623 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TTC9Q92623 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TTC9Q92623 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.28■□□□□ 0.36
TTC9Q92623 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.28■□□□□ 0.36
TTC9Q92623 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.28■□□□□ 0.36
TTC9Q92623 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TTC9Q92623 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TTC9Q92623 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TTC9Q92623 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.28■□□□□ 0.36
TTC9Q92623 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TTC9Q92623 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TTC9Q92623 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TTC9Q92623 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.28■□□□□ 0.36
TTC9Q92623 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TTC9Q92623 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.28■□□□□ 0.36
TTC9Q92623 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
TTC9Q92623 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
TTC9Q92623 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TTC9Q92623 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.28■□□□□ 0.36
TTC9Q92623 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.28■□□□□ 0.36
TTC9Q92623 KRT18P67-201ENST00000432816 1264 ntBASIC17.28■□□□□ 0.36
TTC9Q92623 MCCD1P1-208ENST00000445732 328 ntBASIC17.28■□□□□ 0.36
TTC9Q92623 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.28■□□□□ 0.36
TTC9Q92623 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.28■□□□□ 0.36
TTC9Q92623 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.28■□□□□ 0.36
TTC9Q92623 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
TTC9Q92623 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TTC9Q92623 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TTC9Q92623 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.28■□□□□ 0.36
TTC9Q92623 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.28■□□□□ 0.36
TTC9Q92623 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.28■□□□□ 0.36
TTC9Q92623 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
TTC9Q92623 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TTC9Q92623 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TTC9Q92623 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TTC9Q92623 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
TTC9Q92623 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TTC9Q92623 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TTC9Q92623 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TTC9Q92623 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TTC9Q92623 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TTC9Q92623 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TTC9Q92623 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms