Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.04■□□□□ 0.16
AP3S1Q92572 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.04■□□□□ 0.16
AP3S1Q92572 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
AP3S1Q92572 HTR7P1-201ENST00000538670 1336 ntBASIC16.04■□□□□ 0.16
AP3S1Q92572 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
AP3S1Q92572 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
AP3S1Q92572 TREX2-204ENST00000370212 861 ntTSL 5 BASIC16.04■□□□□ 0.16
AP3S1Q92572 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
AP3S1Q92572 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
AP3S1Q92572 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
AP3S1Q92572 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
AP3S1Q92572 KRT18P41-201ENST00000518924 1277 ntBASIC16.04■□□□□ 0.16
AP3S1Q92572 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC16.04■□□□□ 0.16
AP3S1Q92572 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC16.04■□□□□ 0.16
AP3S1Q92572 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC16.04■□□□□ 0.16
AP3S1Q92572 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
AP3S1Q92572 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC16.04■□□□□ 0.16
AP3S1Q92572 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC16.04■□□□□ 0.16
AP3S1Q92572 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC16.04■□□□□ 0.16
AP3S1Q92572 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.04■□□□□ 0.16
AP3S1Q92572 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.04■□□□□ 0.16
AP3S1Q92572 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC16.04■□□□□ 0.16
AP3S1Q92572 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
AP3S1Q92572 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
AP3S1Q92572 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
AP3S1Q92572 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
AP3S1Q92572 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
AP3S1Q92572 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
AP3S1Q92572 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
AP3S1Q92572 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.04■□□□□ 0.16
AP3S1Q92572 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
AP3S1Q92572 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
AP3S1Q92572 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
AP3S1Q92572 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
AP3S1Q92572 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
AP3S1Q92572 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
AP3S1Q92572 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
AP3S1Q92572 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
AP3S1Q92572 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
AP3S1Q92572 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.03■□□□□ 0.16
AP3S1Q92572 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
AP3S1Q92572 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
AP3S1Q92572 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
AP3S1Q92572 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.03■□□□□ 0.16
AP3S1Q92572 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
AP3S1Q92572 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
AP3S1Q92572 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
AP3S1Q92572 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
AP3S1Q92572 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
AP3S1Q92572 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
AP3S1Q92572 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC16.03■□□□□ 0.16
AP3S1Q92572 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC16.03■□□□□ 0.16
AP3S1Q92572 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC16.03■□□□□ 0.16
AP3S1Q92572 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC16.03■□□□□ 0.16
AP3S1Q92572 AC137761.2-201ENST00000561729 223 ntBASIC16.03■□□□□ 0.16
AP3S1Q92572 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC16.03■□□□□ 0.16
AP3S1Q92572 AC145350.3-201ENST00000569033 163 ntBASIC16.03■□□□□ 0.16
AP3S1Q92572 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC16.03■□□□□ 0.16
AP3S1Q92572 AL139246.5-201ENST00000606645 996 ntBASIC16.03■□□□□ 0.16
AP3S1Q92572 WWOX-218ENST00000627394 894 ntTSL 5 BASIC16.03■□□□□ 0.16
AP3S1Q92572 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
AP3S1Q92572 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
AP3S1Q92572 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.03■□□□□ 0.16
AP3S1Q92572 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
AP3S1Q92572 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
AP3S1Q92572 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
AP3S1Q92572 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
AP3S1Q92572 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
AP3S1Q92572 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
AP3S1Q92572 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
AP3S1Q92572 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
AP3S1Q92572 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC16.03■□□□□ 0.16
AP3S1Q92572 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
AP3S1Q92572 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.03■□□□□ 0.16
AP3S1Q92572 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
AP3S1Q92572 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
AP3S1Q92572 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
AP3S1Q92572 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
AP3S1Q92572 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
AP3S1Q92572 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
AP3S1Q92572 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
AP3S1Q92572 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
AP3S1Q92572 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
AP3S1Q92572 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
AP3S1Q92572 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
AP3S1Q92572 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
AP3S1Q92572 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.02■□□□□ 0.16
AP3S1Q92572 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
AP3S1Q92572 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
AP3S1Q92572 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.16
AP3S1Q92572 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.02■□□□□ 0.16
AP3S1Q92572 PLD4-205ENST00000553861 667 ntTSL 2 BASIC16.02■□□□□ 0.16
AP3S1Q92572 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
AP3S1Q92572 AC231657.2-201ENST00000624556 255 ntBASIC16.02■□□□□ 0.16
AP3S1Q92572 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
AP3S1Q92572 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
AP3S1Q92572 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
AP3S1Q92572 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
AP3S1Q92572 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
AP3S1Q92572 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms