Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MBD3L1Q8WWY6 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
MBD3L1Q8WWY6 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MBD3L1Q8WWY6 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC14.29□□□□□ -0.12
MBD3L1Q8WWY6 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MBD3L1Q8WWY6 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC14.29□□□□□ -0.12
MBD3L1Q8WWY6 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MBD3L1Q8WWY6 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC14.29□□□□□ -0.12
MBD3L1Q8WWY6 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
MBD3L1Q8WWY6 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
MBD3L1Q8WWY6 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
MBD3L1Q8WWY6 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MBD3L1Q8WWY6 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC14.28□□□□□ -0.12
MBD3L1Q8WWY6 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MBD3L1Q8WWY6 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MBD3L1Q8WWY6 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC14.28□□□□□ -0.12
MBD3L1Q8WWY6 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MBD3L1Q8WWY6 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
MBD3L1Q8WWY6 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC14.28□□□□□ -0.12
MBD3L1Q8WWY6 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MBD3L1Q8WWY6 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MBD3L1Q8WWY6 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
MBD3L1Q8WWY6 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
MBD3L1Q8WWY6 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MBD3L1Q8WWY6 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
MBD3L1Q8WWY6 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
MBD3L1Q8WWY6 SP100-208ENST00000427101 1922 ntTSL 2 BASIC14.28□□□□□ -0.12
MBD3L1Q8WWY6 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC14.28□□□□□ -0.12
MBD3L1Q8WWY6 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
MBD3L1Q8WWY6 AC093010.1-201ENST00000473625 1624 ntBASIC14.28□□□□□ -0.12
MBD3L1Q8WWY6 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.28□□□□□ -0.12
MBD3L1Q8WWY6 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC14.28□□□□□ -0.12
MBD3L1Q8WWY6 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC14.28□□□□□ -0.12
MBD3L1Q8WWY6 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MBD3L1Q8WWY6 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC14.28□□□□□ -0.12
MBD3L1Q8WWY6 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
MBD3L1Q8WWY6 AL139246.5-201ENST00000606645 996 ntBASIC14.28□□□□□ -0.12
MBD3L1Q8WWY6 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.28□□□□□ -0.12
MBD3L1Q8WWY6 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC14.28□□□□□ -0.12
MBD3L1Q8WWY6 DOC2GP-204ENST00000639052 2548 ntBASIC14.28□□□□□ -0.12
MBD3L1Q8WWY6 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
MBD3L1Q8WWY6 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
MBD3L1Q8WWY6 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
MBD3L1Q8WWY6 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
MBD3L1Q8WWY6 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC14.27□□□□□ -0.12
MBD3L1Q8WWY6 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
MBD3L1Q8WWY6 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
MBD3L1Q8WWY6 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
MBD3L1Q8WWY6 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
MBD3L1Q8WWY6 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
MBD3L1Q8WWY6 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
MBD3L1Q8WWY6 RCC2P3-201ENST00000418112 1537 ntBASIC14.27□□□□□ -0.12
MBD3L1Q8WWY6 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
MBD3L1Q8WWY6 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
MBD3L1Q8WWY6 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
MBD3L1Q8WWY6 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
MBD3L1Q8WWY6 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC14.27□□□□□ -0.13
MBD3L1Q8WWY6 AC007322.1-201ENST00000426983 750 ntBASIC14.27□□□□□ -0.13
MBD3L1Q8WWY6 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
MBD3L1Q8WWY6 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
MBD3L1Q8WWY6 AC137761.2-201ENST00000561729 223 ntBASIC14.27□□□□□ -0.13
MBD3L1Q8WWY6 AC145350.3-201ENST00000569033 163 ntBASIC14.27□□□□□ -0.13
MBD3L1Q8WWY6 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
MBD3L1Q8WWY6 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
MBD3L1Q8WWY6 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
MBD3L1Q8WWY6 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
MBD3L1Q8WWY6 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
MBD3L1Q8WWY6 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC14.27□□□□□ -0.13
MBD3L1Q8WWY6 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
MBD3L1Q8WWY6 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
MBD3L1Q8WWY6 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
MBD3L1Q8WWY6 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
MBD3L1Q8WWY6 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC14.27□□□□□ -0.13
MBD3L1Q8WWY6 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
MBD3L1Q8WWY6 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.27□□□□□ -0.13
MBD3L1Q8WWY6 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
MBD3L1Q8WWY6 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
MBD3L1Q8WWY6 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MBD3L1Q8WWY6 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MBD3L1Q8WWY6 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
MBD3L1Q8WWY6 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
MBD3L1Q8WWY6 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
MBD3L1Q8WWY6 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MBD3L1Q8WWY6 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC14.26□□□□□ -0.13
MBD3L1Q8WWY6 PCDHA14-201ENST00000506751 2298 ntBASIC14.26□□□□□ -0.13
MBD3L1Q8WWY6 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC14.26□□□□□ -0.13
MBD3L1Q8WWY6 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MBD3L1Q8WWY6 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
MBD3L1Q8WWY6 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MBD3L1Q8WWY6 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.26□□□□□ -0.13
MBD3L1Q8WWY6 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MBD3L1Q8WWY6 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
MBD3L1Q8WWY6 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
MBD3L1Q8WWY6 NME6-213ENST00000451657 871 ntTSL 2 BASIC14.26□□□□□ -0.13
MBD3L1Q8WWY6 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC14.26□□□□□ -0.13
MBD3L1Q8WWY6 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC14.26□□□□□ -0.13
MBD3L1Q8WWY6 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC14.26□□□□□ -0.13
MBD3L1Q8WWY6 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC14.26□□□□□ -0.13
MBD3L1Q8WWY6 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC14.26□□□□□ -0.13
MBD3L1Q8WWY6 AC011767.1-201ENST00000617410 1153 ntBASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms