Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAF3IP1Q8TDR0 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.98■□□□□ 0.63
TRAF3IP1Q8TDR0 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAF3IP1Q8TDR0 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRAF3IP1Q8TDR0 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
TRAF3IP1Q8TDR0 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.98■□□□□ 0.63
TRAF3IP1Q8TDR0 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAF3IP1Q8TDR0 LINC01568-207ENST00000641790 1380 ntBASIC18.98■□□□□ 0.63
TRAF3IP1Q8TDR0 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAF3IP1Q8TDR0 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAF3IP1Q8TDR0 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.98■□□□□ 0.63
TRAF3IP1Q8TDR0 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAF3IP1Q8TDR0 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAF3IP1Q8TDR0 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAF3IP1Q8TDR0 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
TRAF3IP1Q8TDR0 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAF3IP1Q8TDR0 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAF3IP1Q8TDR0 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAF3IP1Q8TDR0 AC009947.2-201ENST00000444014 672 ntBASIC18.98■□□□□ 0.63
TRAF3IP1Q8TDR0 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAF3IP1Q8TDR0 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAF3IP1Q8TDR0 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.98■□□□□ 0.63
TRAF3IP1Q8TDR0 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
TRAF3IP1Q8TDR0 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRAF3IP1Q8TDR0 AC066615.1-201ENST00000640911 628 ntBASIC18.98■□□□□ 0.63
TRAF3IP1Q8TDR0 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRAF3IP1Q8TDR0 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAF3IP1Q8TDR0 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
TRAF3IP1Q8TDR0 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAF3IP1Q8TDR0 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAF3IP1Q8TDR0 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.98■□□□□ 0.63
TRAF3IP1Q8TDR0 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.98■□□□□ 0.63
TRAF3IP1Q8TDR0 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAF3IP1Q8TDR0 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.98■□□□□ 0.63
TRAF3IP1Q8TDR0 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
TRAF3IP1Q8TDR0 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.98■□□□□ 0.63
TRAF3IP1Q8TDR0 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRAF3IP1Q8TDR0 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRAF3IP1Q8TDR0 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRAF3IP1Q8TDR0 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAF3IP1Q8TDR0 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.97■□□□□ 0.63
TRAF3IP1Q8TDR0 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.97■□□□□ 0.63
TRAF3IP1Q8TDR0 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRAF3IP1Q8TDR0 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.97■□□□□ 0.63
TRAF3IP1Q8TDR0 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAF3IP1Q8TDR0 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRAF3IP1Q8TDR0 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
TRAF3IP1Q8TDR0 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRAF3IP1Q8TDR0 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.97■□□□□ 0.63
TRAF3IP1Q8TDR0 MIR3180-4-201ENST00000582223 153 ntBASIC18.97■□□□□ 0.63
TRAF3IP1Q8TDR0 FAM87A-204ENST00000613235 858 ntBASIC18.97■□□□□ 0.63
TRAF3IP1Q8TDR0 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRAF3IP1Q8TDR0 NOC2LP2-201ENST00000407594 1944 ntBASIC18.97■□□□□ 0.63
TRAF3IP1Q8TDR0 AC138028.4-201ENST00000564984 1845 ntBASIC18.97■□□□□ 0.63
TRAF3IP1Q8TDR0 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
TRAF3IP1Q8TDR0 AL096828.2-201ENST00000567259 1965 ntBASIC18.97■□□□□ 0.63
TRAF3IP1Q8TDR0 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAF3IP1Q8TDR0 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.97■□□□□ 0.63
TRAF3IP1Q8TDR0 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRAF3IP1Q8TDR0 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.97■□□□□ 0.63
TRAF3IP1Q8TDR0 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.97■□□□□ 0.63
TRAF3IP1Q8TDR0 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAF3IP1Q8TDR0 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRAF3IP1Q8TDR0 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAF3IP1Q8TDR0 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.96■□□□□ 0.63
TRAF3IP1Q8TDR0 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRAF3IP1Q8TDR0 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
TRAF3IP1Q8TDR0 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAF3IP1Q8TDR0 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.96■□□□□ 0.63
TRAF3IP1Q8TDR0 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRAF3IP1Q8TDR0 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.96■□□□□ 0.63
TRAF3IP1Q8TDR0 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRAF3IP1Q8TDR0 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRAF3IP1Q8TDR0 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAF3IP1Q8TDR0 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAF3IP1Q8TDR0 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.96■□□□□ 0.63
TRAF3IP1Q8TDR0 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
TRAF3IP1Q8TDR0 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAF3IP1Q8TDR0 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAF3IP1Q8TDR0 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAF3IP1Q8TDR0 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAF3IP1Q8TDR0 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAF3IP1Q8TDR0 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRAF3IP1Q8TDR0 AC010240.3-201ENST00000607688 395 ntBASIC18.96■□□□□ 0.63
TRAF3IP1Q8TDR0 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.96■□□□□ 0.63
TRAF3IP1Q8TDR0 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.96■□□□□ 0.63
TRAF3IP1Q8TDR0 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAF3IP1Q8TDR0 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAF3IP1Q8TDR0 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAF3IP1Q8TDR0 PHGDH-209ENST00000641074 1780 ntBASIC18.96■□□□□ 0.63
TRAF3IP1Q8TDR0 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAF3IP1Q8TDR0 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAF3IP1Q8TDR0 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAF3IP1Q8TDR0 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
TRAF3IP1Q8TDR0 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
TRAF3IP1Q8TDR0 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRAF3IP1Q8TDR0 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRAF3IP1Q8TDR0 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.95■□□□□ 0.62
TRAF3IP1Q8TDR0 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
TRAF3IP1Q8TDR0 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms