Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDH19Q8TAB3 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
PCDH19Q8TAB3 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDH19Q8TAB3 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
PCDH19Q8TAB3 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDH19Q8TAB3 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PCDH19Q8TAB3 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDH19Q8TAB3 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDH19Q8TAB3 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDH19Q8TAB3 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDH19Q8TAB3 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PCDH19Q8TAB3 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDH19Q8TAB3 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
PCDH19Q8TAB3 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
PCDH19Q8TAB3 AK4P3-201ENST00000418260 669 ntBASIC18.78■□□□□ 0.6
PCDH19Q8TAB3 YBX1P2-201ENST00000489612 999 ntBASIC18.78■□□□□ 0.6
PCDH19Q8TAB3 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDH19Q8TAB3 AC087388.1-201ENST00000571370 1112 ntBASIC18.78■□□□□ 0.6
PCDH19Q8TAB3 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDH19Q8TAB3 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDH19Q8TAB3 AC079602.3-201ENST00000623931 403 ntBASIC18.78■□□□□ 0.6
PCDH19Q8TAB3 AL031432.5-201ENST00000641059 760 ntBASIC18.78■□□□□ 0.6
PCDH19Q8TAB3 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
PCDH19Q8TAB3 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
PCDH19Q8TAB3 AC132938.6-201ENST00000623828 1655 ntBASIC18.78■□□□□ 0.6
PCDH19Q8TAB3 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDH19Q8TAB3 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDH19Q8TAB3 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDH19Q8TAB3 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDH19Q8TAB3 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
PCDH19Q8TAB3 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDH19Q8TAB3 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDH19Q8TAB3 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDH19Q8TAB3 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDH19Q8TAB3 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDH19Q8TAB3 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDH19Q8TAB3 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
PCDH19Q8TAB3 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.77■□□□□ 0.6
PCDH19Q8TAB3 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDH19Q8TAB3 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDH19Q8TAB3 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDH19Q8TAB3 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.77■□□□□ 0.6
PCDH19Q8TAB3 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDH19Q8TAB3 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
PCDH19Q8TAB3 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDH19Q8TAB3 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDH19Q8TAB3 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.77■□□□□ 0.6
PCDH19Q8TAB3 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDH19Q8TAB3 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.77■□□□□ 0.6
PCDH19Q8TAB3 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDH19Q8TAB3 AC117947.1-201ENST00000427448 529 ntBASIC18.77■□□□□ 0.6
PCDH19Q8TAB3 SLC25A6P5-201ENST00000435663 894 ntBASIC18.77■□□□□ 0.6
PCDH19Q8TAB3 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.77■□□□□ 0.6
PCDH19Q8TAB3 AC034232.1-201ENST00000506026 1064 ntBASIC18.77■□□□□ 0.6
PCDH19Q8TAB3 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
PCDH19Q8TAB3 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDH19Q8TAB3 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDH19Q8TAB3 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.77■□□□□ 0.6
PCDH19Q8TAB3 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDH19Q8TAB3 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDH19Q8TAB3 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
PCDH19Q8TAB3 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDH19Q8TAB3 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.76■□□□□ 0.59
PCDH19Q8TAB3 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDH19Q8TAB3 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDH19Q8TAB3 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDH19Q8TAB3 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
PCDH19Q8TAB3 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDH19Q8TAB3 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.76■□□□□ 0.59
PCDH19Q8TAB3 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDH19Q8TAB3 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDH19Q8TAB3 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDH19Q8TAB3 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDH19Q8TAB3 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
PCDH19Q8TAB3 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDH19Q8TAB3 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDH19Q8TAB3 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.76■□□□□ 0.59
PCDH19Q8TAB3 SPDYE15P-201ENST00000424157 909 ntBASIC18.76■□□□□ 0.59
PCDH19Q8TAB3 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.76■□□□□ 0.59
PCDH19Q8TAB3 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDH19Q8TAB3 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.76■□□□□ 0.59
PCDH19Q8TAB3 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PCDH19Q8TAB3 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDH19Q8TAB3 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.76■□□□□ 0.59
PCDH19Q8TAB3 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDH19Q8TAB3 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDH19Q8TAB3 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDH19Q8TAB3 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PCDH19Q8TAB3 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDH19Q8TAB3 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDH19Q8TAB3 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDH19Q8TAB3 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
PCDH19Q8TAB3 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDH19Q8TAB3 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDH19Q8TAB3 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDH19Q8TAB3 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.75■□□□□ 0.59
PCDH19Q8TAB3 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDH19Q8TAB3 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDH19Q8TAB3 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDH19Q8TAB3 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms