Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
SVIPQ8NHG7 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
SVIPQ8NHG7 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
SVIPQ8NHG7 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC11.35□□□□□ -0.59
SVIPQ8NHG7 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SVIPQ8NHG7 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC11.35□□□□□ -0.59
SVIPQ8NHG7 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
SVIPQ8NHG7 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
SVIPQ8NHG7 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC11.35□□□□□ -0.59
SVIPQ8NHG7 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
SVIPQ8NHG7 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
SVIPQ8NHG7 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SVIPQ8NHG7 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
SVIPQ8NHG7 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SVIPQ8NHG7 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
SVIPQ8NHG7 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC11.35□□□□□ -0.59
SVIPQ8NHG7 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
SVIPQ8NHG7 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
SVIPQ8NHG7 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SVIPQ8NHG7 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC11.35□□□□□ -0.59
SVIPQ8NHG7 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC11.35□□□□□ -0.59
SVIPQ8NHG7 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SVIPQ8NHG7 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SVIPQ8NHG7 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SVIPQ8NHG7 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
SVIPQ8NHG7 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
SVIPQ8NHG7 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SVIPQ8NHG7 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SVIPQ8NHG7 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
SVIPQ8NHG7 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC11.35□□□□□ -0.59
SVIPQ8NHG7 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC11.35□□□□□ -0.59
SVIPQ8NHG7 TWNK-201ENST00000311916 3131 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SVIPQ8NHG7 PTGR2-204ENST00000555228 2543 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
SVIPQ8NHG7 GNAT1-201ENST00000232461 2417 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
SVIPQ8NHG7 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SVIPQ8NHG7 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC11.35□□□□□ -0.59
SVIPQ8NHG7 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SVIPQ8NHG7 OS9-207ENST00000439210 1946 ntTSL 2 BASIC11.35□□□□□ -0.59
SVIPQ8NHG7 AC026471.6-201ENST00000622954 1905 ntBASIC11.35□□□□□ -0.59
SVIPQ8NHG7 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SVIPQ8NHG7 PNPLA8-208ENST00000453144 3366 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SVIPQ8NHG7 NORAD-201ENST00000565493 5339 ntBASIC11.34□□□□□ -0.59
SVIPQ8NHG7 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SVIPQ8NHG7 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SVIPQ8NHG7 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC11.34□□□□□ -0.59
SVIPQ8NHG7 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC11.34□□□□□ -0.59
SVIPQ8NHG7 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
SVIPQ8NHG7 AC005562.1-201ENST00000583030 3219 ntBASIC11.34□□□□□ -0.59
SVIPQ8NHG7 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC11.34□□□□□ -0.59
SVIPQ8NHG7 AC138470.1-201ENST00000624638 1897 ntBASIC11.34□□□□□ -0.59
SVIPQ8NHG7 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC11.34□□□□□ -0.59
SVIPQ8NHG7 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
SVIPQ8NHG7 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SVIPQ8NHG7 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SVIPQ8NHG7 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC11.34□□□□□ -0.59
SVIPQ8NHG7 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SVIPQ8NHG7 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
SVIPQ8NHG7 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
SVIPQ8NHG7 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SVIPQ8NHG7 AC140479.7-201ENST00000636301 2332 ntBASIC11.34□□□□□ -0.59
SVIPQ8NHG7 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC11.34□□□□□ -0.59
SVIPQ8NHG7 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SVIPQ8NHG7 APOBEC3H-201ENST00000348946 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
SVIPQ8NHG7 LINC01141-203ENST00000426428 2993 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SVIPQ8NHG7 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC11.34□□□□□ -0.59
SVIPQ8NHG7 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SVIPQ8NHG7 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
SVIPQ8NHG7 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
SVIPQ8NHG7 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC11.34□□□□□ -0.59
SVIPQ8NHG7 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SVIPQ8NHG7 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SVIPQ8NHG7 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SVIPQ8NHG7 AL359547.1-201ENST00000419168 2190 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SVIPQ8NHG7 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SVIPQ8NHG7 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
SVIPQ8NHG7 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC11.34□□□□□ -0.59
SVIPQ8NHG7 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC11.34□□□□□ -0.59
SVIPQ8NHG7 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.59
SVIPQ8NHG7 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
SVIPQ8NHG7 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
SVIPQ8NHG7 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.59
SVIPQ8NHG7 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC11.33□□□□□ -0.6
SVIPQ8NHG7 AC090164.3-201ENST00000610780 2143 ntBASIC11.33□□□□□ -0.6
SVIPQ8NHG7 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
SVIPQ8NHG7 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC11.33□□□□□ -0.6
SVIPQ8NHG7 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SVIPQ8NHG7 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
SVIPQ8NHG7 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SVIPQ8NHG7 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SVIPQ8NHG7 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SVIPQ8NHG7 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC11.33□□□□□ -0.6
SVIPQ8NHG7 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SVIPQ8NHG7 LINC01134-203ENST00000442673 3059 ntTSL 2 BASIC11.33□□□□□ -0.6
SVIPQ8NHG7 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SVIPQ8NHG7 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SVIPQ8NHG7 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC11.33□□□□□ -0.6
SVIPQ8NHG7 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
SVIPQ8NHG7 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
SVIPQ8NHG7 AC073065.1-201ENST00000411678 2866 ntBASIC11.33□□□□□ -0.6
SVIPQ8NHG7 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms