Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 GMCL1P1-201ENST00000463439 1581 ntBASIC17.79■□□□□ 0.44
CPSF7Q8N684 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CPSF7Q8N684 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPSF7Q8N684 PHGDH-209ENST00000641074 1780 ntBASIC17.79■□□□□ 0.44
CPSF7Q8N684 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPSF7Q8N684 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.79■□□□□ 0.44
CPSF7Q8N684 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPSF7Q8N684 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.79■□□□□ 0.44
CPSF7Q8N684 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPSF7Q8N684 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CPSF7Q8N684 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.79■□□□□ 0.44
CPSF7Q8N684 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPSF7Q8N684 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPSF7Q8N684 MESTP1-201ENST00000404287 994 ntBASIC17.79■□□□□ 0.44
CPSF7Q8N684 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.79■□□□□ 0.44
CPSF7Q8N684 AC004980.1-204ENST00000429707 299 ntBASIC17.79■□□□□ 0.44
CPSF7Q8N684 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.79■□□□□ 0.44
CPSF7Q8N684 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CPSF7Q8N684 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.79■□□□□ 0.44
CPSF7Q8N684 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.79■□□□□ 0.44
CPSF7Q8N684 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CPSF7Q8N684 FITM1-202ENST00000559294 800 ntBASIC17.79■□□□□ 0.44
CPSF7Q8N684 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.79■□□□□ 0.44
CPSF7Q8N684 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.79■□□□□ 0.44
CPSF7Q8N684 AC026271.3-201ENST00000571884 352 ntBASIC17.79■□□□□ 0.44
CPSF7Q8N684 AC145285.6-201ENST00000604632 637 ntBASIC17.79■□□□□ 0.44
CPSF7Q8N684 AC010331.1-201ENST00000611423 582 ntBASIC17.79■□□□□ 0.44
CPSF7Q8N684 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CPSF7Q8N684 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CPSF7Q8N684 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPSF7Q8N684 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CPSF7Q8N684 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.79■□□□□ 0.44
CPSF7Q8N684 FSCN1P1-201ENST00000568912 1481 ntBASIC17.79■□□□□ 0.44
CPSF7Q8N684 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPSF7Q8N684 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.79■□□□□ 0.44
CPSF7Q8N684 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.79■□□□□ 0.44
CPSF7Q8N684 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPSF7Q8N684 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPSF7Q8N684 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CPSF7Q8N684 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.79■□□□□ 0.44
CPSF7Q8N684 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.79■□□□□ 0.44
CPSF7Q8N684 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.79■□□□□ 0.44
CPSF7Q8N684 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPSF7Q8N684 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.79■□□□□ 0.44
CPSF7Q8N684 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.79■□□□□ 0.44
CPSF7Q8N684 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CPSF7Q8N684 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CPSF7Q8N684 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CPSF7Q8N684 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.78■□□□□ 0.44
CPSF7Q8N684 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CPSF7Q8N684 AL109659.2-201ENST00000606809 1674 ntBASIC17.78■□□□□ 0.44
CPSF7Q8N684 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CPSF7Q8N684 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CPSF7Q8N684 CYP2D8P-201ENST00000433633 1490 ntBASIC17.78■□□□□ 0.44
CPSF7Q8N684 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CPSF7Q8N684 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.78■□□□□ 0.44
CPSF7Q8N684 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.78■□□□□ 0.44
CPSF7Q8N684 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CPSF7Q8N684 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CPSF7Q8N684 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.78■□□□□ 0.44
CPSF7Q8N684 B3GAT3P1-201ENST00000471720 806 ntBASIC17.78■□□□□ 0.44
CPSF7Q8N684 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.78■□□□□ 0.44
CPSF7Q8N684 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CPSF7Q8N684 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.78■□□□□ 0.44
CPSF7Q8N684 AC131212.4-201ENST00000623606 975 ntBASIC17.78■□□□□ 0.44
CPSF7Q8N684 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CPSF7Q8N684 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.78■□□□□ 0.44
CPSF7Q8N684 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CPSF7Q8N684 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CPSF7Q8N684 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.78■□□□□ 0.44
CPSF7Q8N684 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CPSF7Q8N684 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.78■□□□□ 0.44
CPSF7Q8N684 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CPSF7Q8N684 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CPSF7Q8N684 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CPSF7Q8N684 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CPSF7Q8N684 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CPSF7Q8N684 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CPSF7Q8N684 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.78■□□□□ 0.44
CPSF7Q8N684 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.78■□□□□ 0.44
CPSF7Q8N684 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CPSF7Q8N684 PCDHA12-202ENST00000613593 2588 ntBASIC17.78■□□□□ 0.44
CPSF7Q8N684 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CPSF7Q8N684 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CPSF7Q8N684 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CPSF7Q8N684 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CPSF7Q8N684 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CPSF7Q8N684 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CPSF7Q8N684 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CPSF7Q8N684 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CPSF7Q8N684 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CPSF7Q8N684 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CPSF7Q8N684 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CPSF7Q8N684 AP000593.1-201ENST00000393668 712 ntBASIC17.77■□□□□ 0.44
CPSF7Q8N684 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CPSF7Q8N684 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.77■□□□□ 0.44
CPSF7Q8N684 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CPSF7Q8N684 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.77■□□□□ 0.44
CPSF7Q8N684 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.77■□□□□ 0.44
CPSF7Q8N684 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms