Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
LINC01561Q8N1V8 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC01561Q8N1V8 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC12.23□□□□□ -0.45
LINC01561Q8N1V8 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
LINC01561Q8N1V8 ESRRAP1-201ENST00000400596 1257 ntBASIC12.23□□□□□ -0.45
LINC01561Q8N1V8 AL355802.2-201ENST00000402069 882 ntBASIC12.23□□□□□ -0.45
LINC01561Q8N1V8 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
LINC01561Q8N1V8 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
LINC01561Q8N1V8 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC12.23□□□□□ -0.45
LINC01561Q8N1V8 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC01561Q8N1V8 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC12.23□□□□□ -0.45
LINC01561Q8N1V8 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC12.23□□□□□ -0.45
LINC01561Q8N1V8 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC12.23□□□□□ -0.45
LINC01561Q8N1V8 RPS15-203ENST00000586096 570 ntTSL 2 BASIC12.23□□□□□ -0.45
LINC01561Q8N1V8 AC008687.5-201ENST00000593746 558 ntBASIC12.23□□□□□ -0.45
LINC01561Q8N1V8 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC12.23□□□□□ -0.45
LINC01561Q8N1V8 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC01561Q8N1V8 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC01561Q8N1V8 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
LINC01561Q8N1V8 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
LINC01561Q8N1V8 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC01561Q8N1V8 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC01561Q8N1V8 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
LINC01561Q8N1V8 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC12.23□□□□□ -0.45
LINC01561Q8N1V8 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC01561Q8N1V8 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC01561Q8N1V8 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC12.23□□□□□ -0.45
LINC01561Q8N1V8 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC12.23□□□□□ -0.45
LINC01561Q8N1V8 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
LINC01561Q8N1V8 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC01561Q8N1V8 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC12.22□□□□□ -0.45
LINC01561Q8N1V8 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC01561Q8N1V8 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
LINC01561Q8N1V8 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
LINC01561Q8N1V8 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC01561Q8N1V8 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LINC01561Q8N1V8 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
LINC01561Q8N1V8 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC01561Q8N1V8 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
LINC01561Q8N1V8 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LINC01561Q8N1V8 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC01561Q8N1V8 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
LINC01561Q8N1V8 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC01561Q8N1V8 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC12.22□□□□□ -0.45
LINC01561Q8N1V8 APTR-205ENST00000447009 902 ntTSL 2 BASIC12.22□□□□□ -0.45
LINC01561Q8N1V8 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC12.22□□□□□ -0.45
LINC01561Q8N1V8 ADM-205ENST00000528544 586 ntTSL 2 BASIC12.22□□□□□ -0.45
LINC01561Q8N1V8 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC12.22□□□□□ -0.45
LINC01561Q8N1V8 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LINC01561Q8N1V8 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC12.22□□□□□ -0.45
LINC01561Q8N1V8 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
LINC01561Q8N1V8 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
LINC01561Q8N1V8 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC01561Q8N1V8 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LINC01561Q8N1V8 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC12.22□□□□□ -0.45
LINC01561Q8N1V8 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC01561Q8N1V8 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC01561Q8N1V8 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC01561Q8N1V8 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LINC01561Q8N1V8 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC01561Q8N1V8 AL023806.1-201ENST00000603994 1649 ntBASIC12.22□□□□□ -0.45
LINC01561Q8N1V8 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC12.22□□□□□ -0.45
LINC01561Q8N1V8 NME9-203ENST00000383180 2133 ntTSL 2 BASIC12.22□□□□□ -0.45
LINC01561Q8N1V8 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC12.22□□□□□ -0.45
LINC01561Q8N1V8 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LINC01561Q8N1V8 AL138688.1-201ENST00000624851 1594 ntBASIC12.22□□□□□ -0.45
LINC01561Q8N1V8 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC01561Q8N1V8 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
LINC01561Q8N1V8 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LINC01561Q8N1V8 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LINC01561Q8N1V8 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
LINC01561Q8N1V8 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
LINC01561Q8N1V8 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
LINC01561Q8N1V8 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC12.21□□□□□ -0.45
LINC01561Q8N1V8 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
LINC01561Q8N1V8 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC12.21□□□□□ -0.45
LINC01561Q8N1V8 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
LINC01561Q8N1V8 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LINC01561Q8N1V8 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC12.21□□□□□ -0.45
LINC01561Q8N1V8 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
LINC01561Q8N1V8 HARS-201ENST00000307633 1780 ntTSL 2 BASIC12.21□□□□□ -0.45
LINC01561Q8N1V8 AC022898.2-201ENST00000616822 1312 ntBASIC12.21□□□□□ -0.45
LINC01561Q8N1V8 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
LINC01561Q8N1V8 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LINC01561Q8N1V8 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
LINC01561Q8N1V8 MESTP1-201ENST00000404287 994 ntBASIC12.21□□□□□ -0.45
LINC01561Q8N1V8 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC12.21□□□□□ -0.45
LINC01561Q8N1V8 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC12.21□□□□□ -0.45
LINC01561Q8N1V8 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC12.21□□□□□ -0.45
LINC01561Q8N1V8 MFAP1P1-201ENST00000442257 1255 ntBASIC12.21□□□□□ -0.45
LINC01561Q8N1V8 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC12.21□□□□□ -0.45
LINC01561Q8N1V8 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC12.21□□□□□ -0.45
LINC01561Q8N1V8 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
LINC01561Q8N1V8 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC12.21□□□□□ -0.45
LINC01561Q8N1V8 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC12.21□□□□□ -0.45
LINC01561Q8N1V8 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC12.21□□□□□ -0.45
LINC01561Q8N1V8 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
LINC01561Q8N1V8 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LINC01561Q8N1V8 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
LINC01561Q8N1V8 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms