Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCN4BQ8IWT1 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SCN4BQ8IWT1 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCN4BQ8IWT1 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.15■□□□□ 0.66
SCN4BQ8IWT1 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCN4BQ8IWT1 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SCN4BQ8IWT1 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCN4BQ8IWT1 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SCN4BQ8IWT1 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCN4BQ8IWT1 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SCN4BQ8IWT1 BX323043.1-201ENST00000641006 1765 ntBASIC19.15■□□□□ 0.66
SCN4BQ8IWT1 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCN4BQ8IWT1 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCN4BQ8IWT1 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCN4BQ8IWT1 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCN4BQ8IWT1 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
SCN4BQ8IWT1 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.15■□□□□ 0.66
SCN4BQ8IWT1 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.15■□□□□ 0.66
SCN4BQ8IWT1 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.15■□□□□ 0.66
SCN4BQ8IWT1 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.15■□□□□ 0.66
SCN4BQ8IWT1 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.15■□□□□ 0.66
SCN4BQ8IWT1 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SCN4BQ8IWT1 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SCN4BQ8IWT1 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.15■□□□□ 0.66
SCN4BQ8IWT1 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.15■□□□□ 0.66
SCN4BQ8IWT1 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.15■□□□□ 0.66
SCN4BQ8IWT1 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SCN4BQ8IWT1 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCN4BQ8IWT1 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCN4BQ8IWT1 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SCN4BQ8IWT1 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SCN4BQ8IWT1 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SCN4BQ8IWT1 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.15■□□□□ 0.66
SCN4BQ8IWT1 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SCN4BQ8IWT1 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SCN4BQ8IWT1 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
SCN4BQ8IWT1 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCN4BQ8IWT1 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCN4BQ8IWT1 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCN4BQ8IWT1 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SCN4BQ8IWT1 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SCN4BQ8IWT1 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SCN4BQ8IWT1 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SCN4BQ8IWT1 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.14■□□□□ 0.65
SCN4BQ8IWT1 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SCN4BQ8IWT1 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SCN4BQ8IWT1 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SCN4BQ8IWT1 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
SCN4BQ8IWT1 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SCN4BQ8IWT1 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.14■□□□□ 0.65
SCN4BQ8IWT1 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SCN4BQ8IWT1 NUS1P1-201ENST00000446295 882 ntBASIC19.14■□□□□ 0.65
SCN4BQ8IWT1 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.14■□□□□ 0.65
SCN4BQ8IWT1 AC091607.1-201ENST00000490318 1060 ntBASIC19.14■□□□□ 0.65
SCN4BQ8IWT1 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.14■□□□□ 0.65
SCN4BQ8IWT1 FOSL1P1-201ENST00000511041 816 ntBASIC19.14■□□□□ 0.65
SCN4BQ8IWT1 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC19.14■□□□□ 0.65
SCN4BQ8IWT1 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.14■□□□□ 0.65
SCN4BQ8IWT1 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.14■□□□□ 0.65
SCN4BQ8IWT1 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.14■□□□□ 0.65
SCN4BQ8IWT1 AC138894.3-201ENST00000603787 634 ntBASIC19.14■□□□□ 0.65
SCN4BQ8IWT1 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.14■□□□□ 0.65
SCN4BQ8IWT1 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SCN4BQ8IWT1 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.14■□□□□ 0.65
SCN4BQ8IWT1 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
SCN4BQ8IWT1 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SCN4BQ8IWT1 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SCN4BQ8IWT1 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SCN4BQ8IWT1 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
SCN4BQ8IWT1 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SCN4BQ8IWT1 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SCN4BQ8IWT1 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.14■□□□□ 0.65
SCN4BQ8IWT1 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SCN4BQ8IWT1 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.14■□□□□ 0.65
SCN4BQ8IWT1 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
SCN4BQ8IWT1 ESPNP-201ENST00000270691 2015 ntBASIC19.13■□□□□ 0.65
SCN4BQ8IWT1 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.13■□□□□ 0.65
SCN4BQ8IWT1 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SCN4BQ8IWT1 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SCN4BQ8IWT1 AC093503.3-201ENST00000624917 2352 ntBASIC19.13■□□□□ 0.65
SCN4BQ8IWT1 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SCN4BQ8IWT1 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
SCN4BQ8IWT1 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.13■□□□□ 0.65
SCN4BQ8IWT1 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
SCN4BQ8IWT1 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
SCN4BQ8IWT1 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SCN4BQ8IWT1 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SCN4BQ8IWT1 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SCN4BQ8IWT1 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
SCN4BQ8IWT1 KRT17P6-201ENST00000453795 1220 ntBASIC19.13■□□□□ 0.65
SCN4BQ8IWT1 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
SCN4BQ8IWT1 AC099336.1-202ENST00000602961 463 ntBASIC19.13■□□□□ 0.65
SCN4BQ8IWT1 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.13■□□□□ 0.65
SCN4BQ8IWT1 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
SCN4BQ8IWT1 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SCN4BQ8IWT1 TNXA-203ENST00000507684 2038 ntBASIC19.13■□□□□ 0.65
SCN4BQ8IWT1 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.13■□□□□ 0.65
SCN4BQ8IWT1 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SCN4BQ8IWT1 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SCN4BQ8IWT1 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms