Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.05■□□□□ 0.48
APLFQ8IW19 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
APLFQ8IW19 RNF152P1-201ENST00000397754 604 ntBASIC18.05■□□□□ 0.48
APLFQ8IW19 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.05■□□□□ 0.48
APLFQ8IW19 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.05■□□□□ 0.48
APLFQ8IW19 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.05■□□□□ 0.48
APLFQ8IW19 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
APLFQ8IW19 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.05■□□□□ 0.48
APLFQ8IW19 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.05■□□□□ 0.48
APLFQ8IW19 MYC-208ENST00000641036 567 ntBASIC18.05■□□□□ 0.48
APLFQ8IW19 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
APLFQ8IW19 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.05■□□□□ 0.48
APLFQ8IW19 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
APLFQ8IW19 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
APLFQ8IW19 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.05■□□□□ 0.48
APLFQ8IW19 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
APLFQ8IW19 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
APLFQ8IW19 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
APLFQ8IW19 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
APLFQ8IW19 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
APLFQ8IW19 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.05■□□□□ 0.48
APLFQ8IW19 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
APLFQ8IW19 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
APLFQ8IW19 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
APLFQ8IW19 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
APLFQ8IW19 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
APLFQ8IW19 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
APLFQ8IW19 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.04■□□□□ 0.48
APLFQ8IW19 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
APLFQ8IW19 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.04■□□□□ 0.48
APLFQ8IW19 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.04■□□□□ 0.48
APLFQ8IW19 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
APLFQ8IW19 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.04■□□□□ 0.48
APLFQ8IW19 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.04■□□□□ 0.48
APLFQ8IW19 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
APLFQ8IW19 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
APLFQ8IW19 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
APLFQ8IW19 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
APLFQ8IW19 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.04■□□□□ 0.48
APLFQ8IW19 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
APLFQ8IW19 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
APLFQ8IW19 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.04■□□□□ 0.48
APLFQ8IW19 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.04■□□□□ 0.48
APLFQ8IW19 SLC25A6P5-201ENST00000435663 894 ntBASIC18.04■□□□□ 0.48
APLFQ8IW19 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.04■□□□□ 0.48
APLFQ8IW19 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.04■□□□□ 0.48
APLFQ8IW19 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.04■□□□□ 0.48
APLFQ8IW19 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.04■□□□□ 0.48
APLFQ8IW19 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
APLFQ8IW19 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
APLFQ8IW19 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
APLFQ8IW19 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
APLFQ8IW19 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
APLFQ8IW19 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
APLFQ8IW19 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.04■□□□□ 0.48
APLFQ8IW19 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
APLFQ8IW19 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC18.04■□□□□ 0.48
APLFQ8IW19 FP475955.4-201ENST00000623131 1990 ntBASIC18.04■□□□□ 0.48
APLFQ8IW19 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
APLFQ8IW19 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
APLFQ8IW19 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
APLFQ8IW19 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
APLFQ8IW19 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
APLFQ8IW19 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.03■□□□□ 0.48
APLFQ8IW19 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
APLFQ8IW19 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
APLFQ8IW19 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
APLFQ8IW19 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
APLFQ8IW19 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
APLFQ8IW19 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.03■□□□□ 0.48
APLFQ8IW19 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
APLFQ8IW19 AL512353.2-201ENST00000448759 1962 ntBASIC18.03■□□□□ 0.48
APLFQ8IW19 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
APLFQ8IW19 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.03■□□□□ 0.48
APLFQ8IW19 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
APLFQ8IW19 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.03■□□□□ 0.48
APLFQ8IW19 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
APLFQ8IW19 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
APLFQ8IW19 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
APLFQ8IW19 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.03■□□□□ 0.48
APLFQ8IW19 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
APLFQ8IW19 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.03■□□□□ 0.48
APLFQ8IW19 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
APLFQ8IW19 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.03■□□□□ 0.48
APLFQ8IW19 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
APLFQ8IW19 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
APLFQ8IW19 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.03■□□□□ 0.48
APLFQ8IW19 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
APLFQ8IW19 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.03■□□□□ 0.48
APLFQ8IW19 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
APLFQ8IW19 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
APLFQ8IW19 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
APLFQ8IW19 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
APLFQ8IW19 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.03■□□□□ 0.48
APLFQ8IW19 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
APLFQ8IW19 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
APLFQ8IW19 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
APLFQ8IW19 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
APLFQ8IW19 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.03■□□□□ 0.48
APLFQ8IW19 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms