Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 STOX2-205ENST00000513034 807 ntTSL 3 BASIC16.51■□□□□ 0.23
CROCCP3Q8IVE0 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CROCCP3Q8IVE0 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CROCCP3Q8IVE0 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CROCCP3Q8IVE0 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CROCCP3Q8IVE0 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC16.51■□□□□ 0.23
CROCCP3Q8IVE0 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CROCCP3Q8IVE0 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CROCCP3Q8IVE0 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CROCCP3Q8IVE0 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CROCCP3Q8IVE0 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CROCCP3Q8IVE0 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.51■□□□□ 0.23
CROCCP3Q8IVE0 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CROCCP3Q8IVE0 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CROCCP3Q8IVE0 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CROCCP3Q8IVE0 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.5■□□□□ 0.23
CROCCP3Q8IVE0 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CROCCP3Q8IVE0 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CROCCP3Q8IVE0 GOLGA6L3-201ENST00000507199 1679 ntBASIC16.5■□□□□ 0.23
CROCCP3Q8IVE0 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CROCCP3Q8IVE0 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CROCCP3Q8IVE0 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.5■□□□□ 0.23
CROCCP3Q8IVE0 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CROCCP3Q8IVE0 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC16.5■□□□□ 0.23
CROCCP3Q8IVE0 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
CROCCP3Q8IVE0 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CROCCP3Q8IVE0 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.5■□□□□ 0.23
CROCCP3Q8IVE0 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CROCCP3Q8IVE0 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CROCCP3Q8IVE0 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CROCCP3Q8IVE0 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CROCCP3Q8IVE0 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CROCCP3Q8IVE0 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC16.5■□□□□ 0.23
CROCCP3Q8IVE0 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CROCCP3Q8IVE0 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC16.5■□□□□ 0.23
CROCCP3Q8IVE0 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CROCCP3Q8IVE0 AC069236.1-201ENST00000604339 616 ntBASIC16.5■□□□□ 0.23
CROCCP3Q8IVE0 RAB43-208ENST00000615093 783 ntTSL 5 BASIC16.5■□□□□ 0.23
CROCCP3Q8IVE0 MYC-208ENST00000641036 567 ntBASIC16.5■□□□□ 0.23
CROCCP3Q8IVE0 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
CROCCP3Q8IVE0 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CROCCP3Q8IVE0 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CROCCP3Q8IVE0 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.5■□□□□ 0.23
CROCCP3Q8IVE0 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CROCCP3Q8IVE0 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC16.5■□□□□ 0.23
CROCCP3Q8IVE0 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CROCCP3Q8IVE0 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CROCCP3Q8IVE0 AC006116.8-202ENST00000587620 1550 ntBASIC16.5■□□□□ 0.23
CROCCP3Q8IVE0 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CROCCP3Q8IVE0 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CROCCP3Q8IVE0 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CROCCP3Q8IVE0 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CROCCP3Q8IVE0 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CROCCP3Q8IVE0 AC106886.4-201ENST00000623557 2502 ntBASIC16.5■□□□□ 0.23
CROCCP3Q8IVE0 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CROCCP3Q8IVE0 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CROCCP3Q8IVE0 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CROCCP3Q8IVE0 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CROCCP3Q8IVE0 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CROCCP3Q8IVE0 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CROCCP3Q8IVE0 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CROCCP3Q8IVE0 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.49■□□□□ 0.23
CROCCP3Q8IVE0 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CROCCP3Q8IVE0 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.49■□□□□ 0.23
CROCCP3Q8IVE0 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.49■□□□□ 0.23
CROCCP3Q8IVE0 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.49■□□□□ 0.23
CROCCP3Q8IVE0 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.49■□□□□ 0.23
CROCCP3Q8IVE0 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CROCCP3Q8IVE0 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CROCCP3Q8IVE0 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CROCCP3Q8IVE0 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CROCCP3Q8IVE0 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC16.49■□□□□ 0.23
CROCCP3Q8IVE0 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CROCCP3Q8IVE0 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC16.49■□□□□ 0.23
CROCCP3Q8IVE0 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
CROCCP3Q8IVE0 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
CROCCP3Q8IVE0 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CROCCP3Q8IVE0 YBX1P10-201ENST00000444752 975 ntBASIC16.49■□□□□ 0.23
CROCCP3Q8IVE0 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CROCCP3Q8IVE0 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC16.49■□□□□ 0.23
CROCCP3Q8IVE0 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC16.49■□□□□ 0.23
CROCCP3Q8IVE0 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC16.49■□□□□ 0.23
CROCCP3Q8IVE0 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CROCCP3Q8IVE0 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CROCCP3Q8IVE0 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CROCCP3Q8IVE0 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CROCCP3Q8IVE0 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.49■□□□□ 0.23
CROCCP3Q8IVE0 AC022188.1-201ENST00000620960 1664 ntBASIC16.49■□□□□ 0.23
CROCCP3Q8IVE0 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CROCCP3Q8IVE0 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CROCCP3Q8IVE0 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CROCCP3Q8IVE0 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CROCCP3Q8IVE0 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CROCCP3Q8IVE0 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CROCCP3Q8IVE0 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CROCCP3Q8IVE0 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.49■□□□□ 0.23
CROCCP3Q8IVE0 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CROCCP3Q8IVE0 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CROCCP3Q8IVE0 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CROCCP3Q8IVE0 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms