Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.1■□□□□ 0.49
NUDCD3Q8IVD9 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
NUDCD3Q8IVD9 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
NUDCD3Q8IVD9 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NUDCD3Q8IVD9 AC034236.2-201ENST00000606662 1610 ntBASIC18.1■□□□□ 0.49
NUDCD3Q8IVD9 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NUDCD3Q8IVD9 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.1■□□□□ 0.49
NUDCD3Q8IVD9 FAM207BP-201ENST00000447172 505 ntBASIC18.1■□□□□ 0.49
NUDCD3Q8IVD9 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.1■□□□□ 0.49
NUDCD3Q8IVD9 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.1■□□□□ 0.49
NUDCD3Q8IVD9 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.1■□□□□ 0.49
NUDCD3Q8IVD9 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.1■□□□□ 0.49
NUDCD3Q8IVD9 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
NUDCD3Q8IVD9 AC104771.1-201ENST00000603335 964 ntBASIC18.1■□□□□ 0.49
NUDCD3Q8IVD9 AL353708.3-201ENST00000610272 989 ntBASIC18.1■□□□□ 0.49
NUDCD3Q8IVD9 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
NUDCD3Q8IVD9 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NUDCD3Q8IVD9 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
NUDCD3Q8IVD9 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NUDCD3Q8IVD9 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NUDCD3Q8IVD9 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
NUDCD3Q8IVD9 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.1■□□□□ 0.49
NUDCD3Q8IVD9 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.1■□□□□ 0.49
NUDCD3Q8IVD9 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NUDCD3Q8IVD9 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.1■□□□□ 0.49
NUDCD3Q8IVD9 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NUDCD3Q8IVD9 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.09■□□□□ 0.49
NUDCD3Q8IVD9 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NUDCD3Q8IVD9 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.09■□□□□ 0.49
NUDCD3Q8IVD9 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NUDCD3Q8IVD9 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.09■□□□□ 0.49
NUDCD3Q8IVD9 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NUDCD3Q8IVD9 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NUDCD3Q8IVD9 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NUDCD3Q8IVD9 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
NUDCD3Q8IVD9 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
NUDCD3Q8IVD9 AC133681.1-201ENST00000465482 601 ntBASIC18.09■□□□□ 0.49
NUDCD3Q8IVD9 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.09■□□□□ 0.49
NUDCD3Q8IVD9 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
NUDCD3Q8IVD9 AC130371.2-201ENST00000619443 611 ntBASIC18.09■□□□□ 0.49
NUDCD3Q8IVD9 AL031985.4-201ENST00000642138 673 ntBASIC18.09■□□□□ 0.49
NUDCD3Q8IVD9 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
NUDCD3Q8IVD9 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
NUDCD3Q8IVD9 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
NUDCD3Q8IVD9 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.09■□□□□ 0.49
NUDCD3Q8IVD9 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NUDCD3Q8IVD9 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NUDCD3Q8IVD9 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.09■□□□□ 0.49
NUDCD3Q8IVD9 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
NUDCD3Q8IVD9 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NUDCD3Q8IVD9 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
NUDCD3Q8IVD9 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.09■□□□□ 0.49
NUDCD3Q8IVD9 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NUDCD3Q8IVD9 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NUDCD3Q8IVD9 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
NUDCD3Q8IVD9 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
NUDCD3Q8IVD9 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
NUDCD3Q8IVD9 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.08■□□□□ 0.49
NUDCD3Q8IVD9 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
NUDCD3Q8IVD9 KRT16P1-201ENST00000399124 1418 ntBASIC18.08■□□□□ 0.49
NUDCD3Q8IVD9 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
NUDCD3Q8IVD9 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
NUDCD3Q8IVD9 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
NUDCD3Q8IVD9 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NUDCD3Q8IVD9 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NUDCD3Q8IVD9 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NUDCD3Q8IVD9 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NUDCD3Q8IVD9 AL023284.2-201ENST00000405850 579 ntBASIC18.08■□□□□ 0.48
NUDCD3Q8IVD9 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NUDCD3Q8IVD9 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.08■□□□□ 0.48
NUDCD3Q8IVD9 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.08■□□□□ 0.48
NUDCD3Q8IVD9 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
NUDCD3Q8IVD9 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
NUDCD3Q8IVD9 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
NUDCD3Q8IVD9 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.08■□□□□ 0.48
NUDCD3Q8IVD9 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NUDCD3Q8IVD9 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NUDCD3Q8IVD9 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
NUDCD3Q8IVD9 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NUDCD3Q8IVD9 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NUDCD3Q8IVD9 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NUDCD3Q8IVD9 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NUDCD3Q8IVD9 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NUDCD3Q8IVD9 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NUDCD3Q8IVD9 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NUDCD3Q8IVD9 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.07■□□□□ 0.48
NUDCD3Q8IVD9 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NUDCD3Q8IVD9 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.07■□□□□ 0.48
NUDCD3Q8IVD9 MCCD1P1-208ENST00000445732 328 ntBASIC18.07■□□□□ 0.48
NUDCD3Q8IVD9 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.07■□□□□ 0.48
NUDCD3Q8IVD9 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NUDCD3Q8IVD9 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.07■□□□□ 0.48
NUDCD3Q8IVD9 RNA5SP413-201ENST00000516373 109 ntBASIC18.07■□□□□ 0.48
NUDCD3Q8IVD9 AC026271.3-201ENST00000571884 352 ntBASIC18.07■□□□□ 0.48
NUDCD3Q8IVD9 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.07■□□□□ 0.48
NUDCD3Q8IVD9 CR392000.1-201ENST00000624770 1228 ntBASIC18.07■□□□□ 0.48
NUDCD3Q8IVD9 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NUDCD3Q8IVD9 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.07■□□□□ 0.48
NUDCD3Q8IVD9 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NUDCD3Q8IVD9 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms