Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 MIR149-201ENST00000384879 89 ntBASIC15.81■□□□□ 0.12
LRRTM1Q86UE6 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC15.81■□□□□ 0.12
LRRTM1Q86UE6 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
LRRTM1Q86UE6 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
LRRTM1Q86UE6 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRTM1Q86UE6 MMAB-206ENST00000540016 945 ntTSL 3 BASIC15.81■□□□□ 0.12
LRRTM1Q86UE6 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LRRTM1Q86UE6 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
LRRTM1Q86UE6 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRTM1Q86UE6 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRTM1Q86UE6 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC15.81■□□□□ 0.12
LRRTM1Q86UE6 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC15.81■□□□□ 0.12
LRRTM1Q86UE6 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LRRTM1Q86UE6 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LRRTM1Q86UE6 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC15.81■□□□□ 0.12
LRRTM1Q86UE6 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LRRTM1Q86UE6 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRTM1Q86UE6 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRTM1Q86UE6 AC009102.3-201ENST00000623118 1491 ntBASIC15.81■□□□□ 0.12
LRRTM1Q86UE6 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC15.81■□□□□ 0.12
LRRTM1Q86UE6 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRTM1Q86UE6 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRTM1Q86UE6 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRTM1Q86UE6 TNRC18P3-201ENST00000441896 2691 ntBASIC15.81■□□□□ 0.12
LRRTM1Q86UE6 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LRRTM1Q86UE6 AD000864.1-201ENST00000624076 2295 ntBASIC15.8■□□□□ 0.12
LRRTM1Q86UE6 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC15.8■□□□□ 0.12
LRRTM1Q86UE6 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LRRTM1Q86UE6 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LRRTM1Q86UE6 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC15.8■□□□□ 0.12
LRRTM1Q86UE6 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRTM1Q86UE6 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRTM1Q86UE6 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRTM1Q86UE6 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC15.8■□□□□ 0.12
LRRTM1Q86UE6 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC15.8■□□□□ 0.12
LRRTM1Q86UE6 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LRRTM1Q86UE6 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRTM1Q86UE6 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LRRTM1Q86UE6 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LRRTM1Q86UE6 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRTM1Q86UE6 B3GAT3P1-201ENST00000471720 806 ntBASIC15.8■□□□□ 0.12
LRRTM1Q86UE6 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
LRRTM1Q86UE6 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC15.8■□□□□ 0.12
LRRTM1Q86UE6 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC15.8■□□□□ 0.12
LRRTM1Q86UE6 RN7SL471P-201ENST00000580476 299 ntBASIC15.8■□□□□ 0.12
LRRTM1Q86UE6 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC15.8■□□□□ 0.12
LRRTM1Q86UE6 CABP2-204ENST00000636477 941 ntTSL 5 BASIC15.8■□□□□ 0.12
LRRTM1Q86UE6 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRTM1Q86UE6 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
LRRTM1Q86UE6 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
LRRTM1Q86UE6 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
LRRTM1Q86UE6 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.8■□□□□ 0.12
LRRTM1Q86UE6 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
LRRTM1Q86UE6 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LRRTM1Q86UE6 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.8■□□□□ 0.12
LRRTM1Q86UE6 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.8■□□□□ 0.12
LRRTM1Q86UE6 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
LRRTM1Q86UE6 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRTM1Q86UE6 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
LRRTM1Q86UE6 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRTM1Q86UE6 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LRRTM1Q86UE6 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRTM1Q86UE6 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.79■□□□□ 0.12
LRRTM1Q86UE6 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
LRRTM1Q86UE6 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRTM1Q86UE6 BUB3-202ENST00000368859 667 ntTSL 3 BASIC15.79■□□□□ 0.12
LRRTM1Q86UE6 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
LRRTM1Q86UE6 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
LRRTM1Q86UE6 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC15.79■□□□□ 0.12
LRRTM1Q86UE6 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC15.79■□□□□ 0.12
LRRTM1Q86UE6 MIR6786-201ENST00000616843 113 ntBASIC15.79■□□□□ 0.12
LRRTM1Q86UE6 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRTM1Q86UE6 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRTM1Q86UE6 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRTM1Q86UE6 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRTM1Q86UE6 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.79■□□□□ 0.12
LRRTM1Q86UE6 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LRRTM1Q86UE6 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LRRTM1Q86UE6 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRTM1Q86UE6 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.79■□□□□ 0.12
LRRTM1Q86UE6 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRTM1Q86UE6 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRTM1Q86UE6 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRTM1Q86UE6 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRTM1Q86UE6 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC15.79■□□□□ 0.12
LRRTM1Q86UE6 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.79■□□□□ 0.12
LRRTM1Q86UE6 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRRTM1Q86UE6 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
LRRTM1Q86UE6 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.78■□□□□ 0.12
LRRTM1Q86UE6 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRTM1Q86UE6 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRTM1Q86UE6 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRTM1Q86UE6 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRTM1Q86UE6 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRTM1Q86UE6 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRTM1Q86UE6 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRRTM1Q86UE6 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRTM1Q86UE6 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRTM1Q86UE6 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRTM1Q86UE6 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms