Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
OTOP1Q7RTM1 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
OTOP1Q7RTM1 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
OTOP1Q7RTM1 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
OTOP1Q7RTM1 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
OTOP1Q7RTM1 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
OTOP1Q7RTM1 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21■□□□□ 0.95
OTOP1Q7RTM1 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
OTOP1Q7RTM1 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
OTOP1Q7RTM1 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
OTOP1Q7RTM1 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
OTOP1Q7RTM1 METTL21AP1-201ENST00000438852 635 ntBASIC21■□□□□ 0.95
OTOP1Q7RTM1 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC21■□□□□ 0.95
OTOP1Q7RTM1 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC21■□□□□ 0.95
OTOP1Q7RTM1 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC21■□□□□ 0.95
OTOP1Q7RTM1 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC21■□□□□ 0.95
OTOP1Q7RTM1 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC21■□□□□ 0.95
OTOP1Q7RTM1 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC21■□□□□ 0.95
OTOP1Q7RTM1 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC21■□□□□ 0.95
OTOP1Q7RTM1 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC21■□□□□ 0.95
OTOP1Q7RTM1 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC21■□□□□ 0.95
OTOP1Q7RTM1 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
OTOP1Q7RTM1 TP73-AS1-210ENST00000637775 1455 ntBASIC21■□□□□ 0.95
OTOP1Q7RTM1 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC21■□□□□ 0.95
OTOP1Q7RTM1 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC21■□□□□ 0.95
OTOP1Q7RTM1 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC21■□□□□ 0.95
OTOP1Q7RTM1 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC21■□□□□ 0.95
OTOP1Q7RTM1 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
OTOP1Q7RTM1 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
OTOP1Q7RTM1 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.99■□□□□ 0.95
OTOP1Q7RTM1 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
OTOP1Q7RTM1 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
OTOP1Q7RTM1 AP000974.1-201ENST00000623909 2387 ntBASIC20.99■□□□□ 0.95
OTOP1Q7RTM1 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC20.99■□□□□ 0.95
OTOP1Q7RTM1 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC20.99■□□□□ 0.95
OTOP1Q7RTM1 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC20.99■□□□□ 0.95
OTOP1Q7RTM1 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC20.99■□□□□ 0.95
OTOP1Q7RTM1 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC20.99■□□□□ 0.95
OTOP1Q7RTM1 HS6ST1P1-201ENST00000481504 1234 ntBASIC20.99■□□□□ 0.95
OTOP1Q7RTM1 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC20.99■□□□□ 0.95
OTOP1Q7RTM1 RFPL4AP1-201ENST00000530883 850 ntBASIC20.99■□□□□ 0.95
OTOP1Q7RTM1 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC20.99■□□□□ 0.95
OTOP1Q7RTM1 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC20.99■□□□□ 0.95
OTOP1Q7RTM1 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC20.99■□□□□ 0.95
OTOP1Q7RTM1 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
OTOP1Q7RTM1 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
OTOP1Q7RTM1 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
OTOP1Q7RTM1 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.99■□□□□ 0.95
OTOP1Q7RTM1 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.99■□□□□ 0.95
OTOP1Q7RTM1 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
OTOP1Q7RTM1 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC20.99■□□□□ 0.95
OTOP1Q7RTM1 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
OTOP1Q7RTM1 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC20.98■□□□□ 0.95
OTOP1Q7RTM1 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
OTOP1Q7RTM1 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
OTOP1Q7RTM1 Z98044.1-201ENST00000632503 1764 ntBASIC20.98■□□□□ 0.95
OTOP1Q7RTM1 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
OTOP1Q7RTM1 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
OTOP1Q7RTM1 AC034236.2-201ENST00000606662 1610 ntBASIC20.98■□□□□ 0.95
OTOP1Q7RTM1 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
OTOP1Q7RTM1 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
OTOP1Q7RTM1 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC20.98■□□□□ 0.95
OTOP1Q7RTM1 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC20.98■□□□□ 0.95
OTOP1Q7RTM1 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC20.98■□□□□ 0.95
OTOP1Q7RTM1 RNA5SP416-201ENST00000516838 111 ntBASIC20.98■□□□□ 0.95
OTOP1Q7RTM1 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC20.98■□□□□ 0.95
OTOP1Q7RTM1 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC20.98■□□□□ 0.95
OTOP1Q7RTM1 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
OTOP1Q7RTM1 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
OTOP1Q7RTM1 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
OTOP1Q7RTM1 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
OTOP1Q7RTM1 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.98■□□□□ 0.95
OTOP1Q7RTM1 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
OTOP1Q7RTM1 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
OTOP1Q7RTM1 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
OTOP1Q7RTM1 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
OTOP1Q7RTM1 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
OTOP1Q7RTM1 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
OTOP1Q7RTM1 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
OTOP1Q7RTM1 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
OTOP1Q7RTM1 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
OTOP1Q7RTM1 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC20.97■□□□□ 0.95
OTOP1Q7RTM1 AC211486.1-202ENST00000416371 468 ntBASIC20.97■□□□□ 0.95
OTOP1Q7RTM1 AP006288.1-201ENST00000446065 395 ntBASIC20.97■□□□□ 0.95
OTOP1Q7RTM1 AC211476.1-201ENST00000503899 468 ntBASIC20.97■□□□□ 0.95
OTOP1Q7RTM1 AC002347.1-201ENST00000569543 541 ntBASIC20.97■□□□□ 0.95
OTOP1Q7RTM1 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
OTOP1Q7RTM1 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
OTOP1Q7RTM1 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.97■□□□□ 0.95
OTOP1Q7RTM1 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.97■□□□□ 0.95
OTOP1Q7RTM1 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
OTOP1Q7RTM1 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.97■□□□□ 0.95
OTOP1Q7RTM1 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
OTOP1Q7RTM1 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
OTOP1Q7RTM1 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
OTOP1Q7RTM1 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
OTOP1Q7RTM1 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
OTOP1Q7RTM1 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
OTOP1Q7RTM1 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
OTOP1Q7RTM1 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms