Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LPCAT4Q643R3 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.16■□□□□ 0.34
LPCAT4Q643R3 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC17.16■□□□□ 0.34
LPCAT4Q643R3 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LPCAT4Q643R3 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LPCAT4Q643R3 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.16■□□□□ 0.34
LPCAT4Q643R3 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LPCAT4Q643R3 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LPCAT4Q643R3 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.16■□□□□ 0.34
LPCAT4Q643R3 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LPCAT4Q643R3 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LPCAT4Q643R3 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LPCAT4Q643R3 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LPCAT4Q643R3 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LPCAT4Q643R3 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LPCAT4Q643R3 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LPCAT4Q643R3 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.15■□□□□ 0.34
LPCAT4Q643R3 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.15■□□□□ 0.34
LPCAT4Q643R3 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LPCAT4Q643R3 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LPCAT4Q643R3 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.15■□□□□ 0.34
LPCAT4Q643R3 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.15■□□□□ 0.34
LPCAT4Q643R3 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.15■□□□□ 0.34
LPCAT4Q643R3 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LPCAT4Q643R3 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LPCAT4Q643R3 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.15■□□□□ 0.34
LPCAT4Q643R3 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LPCAT4Q643R3 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.15■□□□□ 0.34
LPCAT4Q643R3 APTR-203ENST00000430801 583 ntTSL 5 BASIC17.15■□□□□ 0.34
LPCAT4Q643R3 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC17.15■□□□□ 0.34
LPCAT4Q643R3 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LPCAT4Q643R3 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.15■□□□□ 0.34
LPCAT4Q643R3 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LPCAT4Q643R3 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.15■□□□□ 0.34
LPCAT4Q643R3 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LPCAT4Q643R3 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
LPCAT4Q643R3 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LPCAT4Q643R3 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.15■□□□□ 0.34
LPCAT4Q643R3 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.15■□□□□ 0.34
LPCAT4Q643R3 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LPCAT4Q643R3 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
LPCAT4Q643R3 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.15■□□□□ 0.34
LPCAT4Q643R3 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LPCAT4Q643R3 LINC00554-201ENST00000564841 3011 ntBASIC17.15■□□□□ 0.34
LPCAT4Q643R3 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LPCAT4Q643R3 AL138688.1-201ENST00000624851 1594 ntBASIC17.15■□□□□ 0.34
LPCAT4Q643R3 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LPCAT4Q643R3 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
LPCAT4Q643R3 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LPCAT4Q643R3 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LPCAT4Q643R3 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
LPCAT4Q643R3 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LPCAT4Q643R3 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LPCAT4Q643R3 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LPCAT4Q643R3 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.14■□□□□ 0.33
LPCAT4Q643R3 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LPCAT4Q643R3 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
LPCAT4Q643R3 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LPCAT4Q643R3 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LPCAT4Q643R3 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC17.14■□□□□ 0.33
LPCAT4Q643R3 HSCB-202ENST00000398941 955 ntTSL 2 BASIC17.14■□□□□ 0.33
LPCAT4Q643R3 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.14■□□□□ 0.33
LPCAT4Q643R3 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.14■□□□□ 0.33
LPCAT4Q643R3 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LPCAT4Q643R3 AC137761.2-201ENST00000561729 223 ntBASIC17.14■□□□□ 0.33
LPCAT4Q643R3 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC17.14■□□□□ 0.33
LPCAT4Q643R3 AC145350.3-201ENST00000569033 163 ntBASIC17.14■□□□□ 0.33
LPCAT4Q643R3 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.14■□□□□ 0.33
LPCAT4Q643R3 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC17.14■□□□□ 0.33
LPCAT4Q643R3 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
LPCAT4Q643R3 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LPCAT4Q643R3 AC011767.1-201ENST00000617410 1153 ntBASIC17.14■□□□□ 0.33
LPCAT4Q643R3 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
LPCAT4Q643R3 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LPCAT4Q643R3 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LPCAT4Q643R3 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LPCAT4Q643R3 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
LPCAT4Q643R3 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
LPCAT4Q643R3 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.14■□□□□ 0.33
LPCAT4Q643R3 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LPCAT4Q643R3 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LPCAT4Q643R3 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LPCAT4Q643R3 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.14■□□□□ 0.33
LPCAT4Q643R3 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.14■□□□□ 0.33
LPCAT4Q643R3 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.13■□□□□ 0.33
LPCAT4Q643R3 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
LPCAT4Q643R3 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.13■□□□□ 0.33
LPCAT4Q643R3 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
LPCAT4Q643R3 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LPCAT4Q643R3 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
LPCAT4Q643R3 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
LPCAT4Q643R3 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LPCAT4Q643R3 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LPCAT4Q643R3 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.13■□□□□ 0.33
LPCAT4Q643R3 CROCCP1-201ENST00000426910 5675 ntBASIC17.13■□□□□ 0.33
LPCAT4Q643R3 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
LPCAT4Q643R3 KRT8P41-201ENST00000533985 1514 ntBASIC17.13■□□□□ 0.33
LPCAT4Q643R3 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
LPCAT4Q643R3 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LPCAT4Q643R3 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms