Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DQA1Q5Y7H0 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.97■□□□□ 0.31
HLA-DQA1Q5Y7H0 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.97■□□□□ 0.31
HLA-DQA1Q5Y7H0 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DQA1Q5Y7H0 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.97■□□□□ 0.31
HLA-DQA1Q5Y7H0 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
HLA-DQA1Q5Y7H0 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
HLA-DQA1Q5Y7H0 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
HLA-DQA1Q5Y7H0 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.96■□□□□ 0.31
HLA-DQA1Q5Y7H0 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
HLA-DQA1Q5Y7H0 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DQA1Q5Y7H0 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
HLA-DQA1Q5Y7H0 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DQA1Q5Y7H0 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.96■□□□□ 0.31
HLA-DQA1Q5Y7H0 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DQA1Q5Y7H0 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DQA1Q5Y7H0 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DQA1Q5Y7H0 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
HLA-DQA1Q5Y7H0 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DQA1Q5Y7H0 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DQA1Q5Y7H0 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DQA1Q5Y7H0 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
HLA-DQA1Q5Y7H0 KRT18P48-201ENST00000434763 852 ntBASIC16.96■□□□□ 0.31
HLA-DQA1Q5Y7H0 KRT18P35-201ENST00000510488 1269 ntBASIC16.96■□□□□ 0.31
HLA-DQA1Q5Y7H0 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.96■□□□□ 0.31
HLA-DQA1Q5Y7H0 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.96■□□□□ 0.31
HLA-DQA1Q5Y7H0 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.96■□□□□ 0.31
HLA-DQA1Q5Y7H0 AC024563.2-201ENST00000603282 481 ntBASIC16.96■□□□□ 0.31
HLA-DQA1Q5Y7H0 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.96■□□□□ 0.31
HLA-DQA1Q5Y7H0 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DQA1Q5Y7H0 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.96■□□□□ 0.31
HLA-DQA1Q5Y7H0 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DQA1Q5Y7H0 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DQA1Q5Y7H0 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
HLA-DQA1Q5Y7H0 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DQA1Q5Y7H0 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DQA1Q5Y7H0 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DQA1Q5Y7H0 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DQA1Q5Y7H0 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.96■□□□□ 0.31
HLA-DQA1Q5Y7H0 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DQA1Q5Y7H0 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DQA1Q5Y7H0 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DQA1Q5Y7H0 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
HLA-DQA1Q5Y7H0 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
HLA-DQA1Q5Y7H0 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
HLA-DQA1Q5Y7H0 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
HLA-DQA1Q5Y7H0 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
HLA-DQA1Q5Y7H0 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
HLA-DQA1Q5Y7H0 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
HLA-DQA1Q5Y7H0 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.96■□□□□ 0.3
HLA-DQA1Q5Y7H0 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
HLA-DQA1Q5Y7H0 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.96■□□□□ 0.3
HLA-DQA1Q5Y7H0 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.95■□□□□ 0.3
HLA-DQA1Q5Y7H0 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DQA1Q5Y7H0 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DQA1Q5Y7H0 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
HLA-DQA1Q5Y7H0 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DQA1Q5Y7H0 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DQA1Q5Y7H0 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DQA1Q5Y7H0 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DQA1Q5Y7H0 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DQA1Q5Y7H0 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DQA1Q5Y7H0 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DQA1Q5Y7H0 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DQA1Q5Y7H0 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.95■□□□□ 0.3
HLA-DQA1Q5Y7H0 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.95■□□□□ 0.3
HLA-DQA1Q5Y7H0 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.95■□□□□ 0.3
HLA-DQA1Q5Y7H0 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.95■□□□□ 0.3
HLA-DQA1Q5Y7H0 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DQA1Q5Y7H0 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DQA1Q5Y7H0 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DQA1Q5Y7H0 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DQA1Q5Y7H0 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DQA1Q5Y7H0 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.95■□□□□ 0.3
HLA-DQA1Q5Y7H0 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DQA1Q5Y7H0 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DQA1Q5Y7H0 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.95■□□□□ 0.3
HLA-DQA1Q5Y7H0 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DQA1Q5Y7H0 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DQA1Q5Y7H0 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.94■□□□□ 0.3
HLA-DQA1Q5Y7H0 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.94■□□□□ 0.3
HLA-DQA1Q5Y7H0 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
HLA-DQA1Q5Y7H0 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DQA1Q5Y7H0 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DQA1Q5Y7H0 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DQA1Q5Y7H0 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC16.94■□□□□ 0.3
HLA-DQA1Q5Y7H0 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DQA1Q5Y7H0 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.94■□□□□ 0.3
HLA-DQA1Q5Y7H0 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
HLA-DQA1Q5Y7H0 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
HLA-DQA1Q5Y7H0 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.94■□□□□ 0.3
HLA-DQA1Q5Y7H0 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DQA1Q5Y7H0 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DQA1Q5Y7H0 HLA-F-220ENST00000434407 884 ntBASIC16.94■□□□□ 0.3
HLA-DQA1Q5Y7H0 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.94■□□□□ 0.3
HLA-DQA1Q5Y7H0 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.94■□□□□ 0.3
HLA-DQA1Q5Y7H0 AL445228.2-201ENST00000605589 952 ntBASIC16.94■□□□□ 0.3
HLA-DQA1Q5Y7H0 AL121956.5-201ENST00000625261 221 ntBASIC16.94■□□□□ 0.3
HLA-DQA1Q5Y7H0 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
HLA-DQA1Q5Y7H0 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms