Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
VARS2Q5ST30 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
VARS2Q5ST30 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VARS2Q5ST30 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VARS2Q5ST30 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
VARS2Q5ST30 ESPNP-201ENST00000270691 2015 ntBASIC19.2■□□□□ 0.66
VARS2Q5ST30 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VARS2Q5ST30 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VARS2Q5ST30 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC19.2■□□□□ 0.66
VARS2Q5ST30 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VARS2Q5ST30 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
VARS2Q5ST30 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
VARS2Q5ST30 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC19.2■□□□□ 0.66
VARS2Q5ST30 RCN1P2-201ENST00000398357 915 ntBASIC19.2■□□□□ 0.66
VARS2Q5ST30 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
VARS2Q5ST30 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
VARS2Q5ST30 THAP5-204ENST00000438865 868 ntTSL 2 BASIC19.2■□□□□ 0.66
VARS2Q5ST30 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VARS2Q5ST30 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC19.2■□□□□ 0.66
VARS2Q5ST30 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.2■□□□□ 0.66
VARS2Q5ST30 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
VARS2Q5ST30 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC19.2■□□□□ 0.66
VARS2Q5ST30 SLC25A6P4-201ENST00000586535 553 ntBASIC19.2■□□□□ 0.66
VARS2Q5ST30 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC19.2■□□□□ 0.66
VARS2Q5ST30 VPS51-217ENST00000639871 243 ntTSL 5 BASIC19.2■□□□□ 0.66
VARS2Q5ST30 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VARS2Q5ST30 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
VARS2Q5ST30 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VARS2Q5ST30 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
VARS2Q5ST30 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VARS2Q5ST30 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VARS2Q5ST30 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.19■□□□□ 0.66
VARS2Q5ST30 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VARS2Q5ST30 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
VARS2Q5ST30 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VARS2Q5ST30 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VARS2Q5ST30 MRPL3P1-201ENST00000400109 1033 ntBASIC19.19■□□□□ 0.66
VARS2Q5ST30 MEG3-211ENST00000452514 461 ntTSL 3 BASIC19.19■□□□□ 0.66
VARS2Q5ST30 AC106795.1-205ENST00000512851 1056 ntBASIC19.19■□□□□ 0.66
VARS2Q5ST30 AL138831.2-201ENST00000606564 490 ntBASIC19.19■□□□□ 0.66
VARS2Q5ST30 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
VARS2Q5ST30 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
VARS2Q5ST30 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VARS2Q5ST30 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
VARS2Q5ST30 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
VARS2Q5ST30 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.19■□□□□ 0.66
VARS2Q5ST30 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VARS2Q5ST30 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VARS2Q5ST30 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.18■□□□□ 0.66
VARS2Q5ST30 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
VARS2Q5ST30 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VARS2Q5ST30 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.18■□□□□ 0.66
VARS2Q5ST30 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC19.18■□□□□ 0.66
VARS2Q5ST30 AC009533.2-201ENST00000543664 586 ntBASIC19.18■□□□□ 0.66
VARS2Q5ST30 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC19.18■□□□□ 0.66
VARS2Q5ST30 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC19.18■□□□□ 0.66
VARS2Q5ST30 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC19.18■□□□□ 0.66
VARS2Q5ST30 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
VARS2Q5ST30 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.18■□□□□ 0.66
VARS2Q5ST30 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.18■□□□□ 0.66
VARS2Q5ST30 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
VARS2Q5ST30 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
VARS2Q5ST30 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
VARS2Q5ST30 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
VARS2Q5ST30 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.18■□□□□ 0.66
VARS2Q5ST30 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
VARS2Q5ST30 AC125634.1-201ENST00000438758 1403 ntBASIC19.17■□□□□ 0.66
VARS2Q5ST30 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VARS2Q5ST30 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
VARS2Q5ST30 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
VARS2Q5ST30 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.17■□□□□ 0.66
VARS2Q5ST30 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
VARS2Q5ST30 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
VARS2Q5ST30 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
VARS2Q5ST30 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VARS2Q5ST30 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.17■□□□□ 0.66
VARS2Q5ST30 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC19.17■□□□□ 0.66
VARS2Q5ST30 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC19.17■□□□□ 0.66
VARS2Q5ST30 AC132008.2-207ENST00000454517 770 ntBASIC19.17■□□□□ 0.66
VARS2Q5ST30 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
VARS2Q5ST30 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC19.17■□□□□ 0.66
VARS2Q5ST30 AC112698.1-201ENST00000510299 916 ntBASIC19.17■□□□□ 0.66
VARS2Q5ST30 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC19.17■□□□□ 0.66
VARS2Q5ST30 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
VARS2Q5ST30 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.17■□□□□ 0.66
VARS2Q5ST30 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
VARS2Q5ST30 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
VARS2Q5ST30 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
VARS2Q5ST30 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC19.17■□□□□ 0.66
VARS2Q5ST30 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.17■□□□□ 0.66
VARS2Q5ST30 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VARS2Q5ST30 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
VARS2Q5ST30 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VARS2Q5ST30 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
VARS2Q5ST30 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
VARS2Q5ST30 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VARS2Q5ST30 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
VARS2Q5ST30 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.16■□□□□ 0.66
VARS2Q5ST30 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.16■□□□□ 0.66
VARS2Q5ST30 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms