Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.56■□□□□ 0.4
RSPO4Q2I0M5 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.56■□□□□ 0.4
RSPO4Q2I0M5 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.56■□□□□ 0.4
RSPO4Q2I0M5 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC17.56■□□□□ 0.4
RSPO4Q2I0M5 AP000344.2-201ENST00000512987 629 ntBASIC17.56■□□□□ 0.4
RSPO4Q2I0M5 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC17.56■□□□□ 0.4
RSPO4Q2I0M5 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
RSPO4Q2I0M5 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.56■□□□□ 0.4
RSPO4Q2I0M5 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.56■□□□□ 0.4
RSPO4Q2I0M5 AJ011932.1-201ENST00000621707 465 ntBASIC17.56■□□□□ 0.4
RSPO4Q2I0M5 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RSPO4Q2I0M5 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.56■□□□□ 0.4
RSPO4Q2I0M5 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RSPO4Q2I0M5 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RSPO4Q2I0M5 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RSPO4Q2I0M5 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.56■□□□□ 0.4
RSPO4Q2I0M5 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RSPO4Q2I0M5 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RSPO4Q2I0M5 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.55■□□□□ 0.4
RSPO4Q2I0M5 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC17.55■□□□□ 0.4
RSPO4Q2I0M5 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RSPO4Q2I0M5 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RSPO4Q2I0M5 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RSPO4Q2I0M5 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
RSPO4Q2I0M5 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.55■□□□□ 0.4
RSPO4Q2I0M5 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RSPO4Q2I0M5 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RSPO4Q2I0M5 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RSPO4Q2I0M5 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RSPO4Q2I0M5 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.55■□□□□ 0.4
RSPO4Q2I0M5 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.55■□□□□ 0.4
RSPO4Q2I0M5 BX005266.1-201ENST00000473402 457 ntBASIC17.55■□□□□ 0.4
RSPO4Q2I0M5 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC17.55■□□□□ 0.4
RSPO4Q2I0M5 AC136632.2-201ENST00000512891 861 ntBASIC17.55■□□□□ 0.4
RSPO4Q2I0M5 AC025678.2-201ENST00000562061 970 ntBASIC17.55■□□□□ 0.4
RSPO4Q2I0M5 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.55■□□□□ 0.4
RSPO4Q2I0M5 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.55■□□□□ 0.4
RSPO4Q2I0M5 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.55■□□□□ 0.4
RSPO4Q2I0M5 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.55■□□□□ 0.4
RSPO4Q2I0M5 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
RSPO4Q2I0M5 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RSPO4Q2I0M5 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RSPO4Q2I0M5 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.55■□□□□ 0.4
RSPO4Q2I0M5 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RSPO4Q2I0M5 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RSPO4Q2I0M5 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RSPO4Q2I0M5 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC17.55■□□□□ 0.4
RSPO4Q2I0M5 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RSPO4Q2I0M5 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RSPO4Q2I0M5 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RSPO4Q2I0M5 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RSPO4Q2I0M5 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RSPO4Q2I0M5 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RSPO4Q2I0M5 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.54■□□□□ 0.4
RSPO4Q2I0M5 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
RSPO4Q2I0M5 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RSPO4Q2I0M5 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.54■□□□□ 0.4
RSPO4Q2I0M5 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RSPO4Q2I0M5 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RSPO4Q2I0M5 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
RSPO4Q2I0M5 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RSPO4Q2I0M5 AC073621.1-201ENST00000392730 636 ntBASIC17.54■□□□□ 0.4
RSPO4Q2I0M5 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RSPO4Q2I0M5 PMS2P4-201ENST00000412466 1052 ntBASIC17.54■□□□□ 0.4
RSPO4Q2I0M5 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.54■□□□□ 0.4
RSPO4Q2I0M5 RNA5SP421-201ENST00000516864 134 ntBASIC17.54■□□□□ 0.4
RSPO4Q2I0M5 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RSPO4Q2I0M5 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.54■□□□□ 0.4
RSPO4Q2I0M5 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RSPO4Q2I0M5 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RSPO4Q2I0M5 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RSPO4Q2I0M5 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RSPO4Q2I0M5 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RSPO4Q2I0M5 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
RSPO4Q2I0M5 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RSPO4Q2I0M5 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RSPO4Q2I0M5 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
RSPO4Q2I0M5 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.53■□□□□ 0.4
RSPO4Q2I0M5 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
RSPO4Q2I0M5 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RSPO4Q2I0M5 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
RSPO4Q2I0M5 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RSPO4Q2I0M5 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
RSPO4Q2I0M5 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RSPO4Q2I0M5 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.53■□□□□ 0.4
RSPO4Q2I0M5 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.53■□□□□ 0.4
RSPO4Q2I0M5 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RSPO4Q2I0M5 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.53■□□□□ 0.4
RSPO4Q2I0M5 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.53■□□□□ 0.4
RSPO4Q2I0M5 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RSPO4Q2I0M5 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RSPO4Q2I0M5 KRT8P32-201ENST00000512863 1461 ntBASIC17.53■□□□□ 0.4
RSPO4Q2I0M5 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
RSPO4Q2I0M5 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RSPO4Q2I0M5 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.53■□□□□ 0.4
RSPO4Q2I0M5 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.53■□□□□ 0.4
RSPO4Q2I0M5 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC17.53■□□□□ 0.4
RSPO4Q2I0M5 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.53■□□□□ 0.4
RSPO4Q2I0M5 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RSPO4Q2I0M5 AC113404.2-201ENST00000507884 177 ntBASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms