Protein–RNA interactions for Protein: Q08554

DSC1, Desmocollin-1, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DSC1Q08554 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DSC1Q08554 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DSC1Q08554 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DSC1Q08554 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
DSC1Q08554 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.27■□□□□ 0.67
DSC1Q08554 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
DSC1Q08554 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.27■□□□□ 0.67
DSC1Q08554 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
DSC1Q08554 IL9RP2-201ENST00000423948 1312 ntBASIC19.26■□□□□ 0.67
DSC1Q08554 AC097374.2-201ENST00000618617 1306 ntBASIC19.26■□□□□ 0.67
DSC1Q08554 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
DSC1Q08554 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
DSC1Q08554 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
DSC1Q08554 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DSC1Q08554 AC093010.1-201ENST00000473625 1624 ntBASIC19.26■□□□□ 0.67
DSC1Q08554 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
DSC1Q08554 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.26■□□□□ 0.67
DSC1Q08554 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DSC1Q08554 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DSC1Q08554 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
DSC1Q08554 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
DSC1Q08554 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
DSC1Q08554 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC19.26■□□□□ 0.67
DSC1Q08554 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC19.26■□□□□ 0.67
DSC1Q08554 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC19.26■□□□□ 0.67
DSC1Q08554 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC19.26■□□□□ 0.67
DSC1Q08554 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
DSC1Q08554 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.26■□□□□ 0.67
DSC1Q08554 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DSC1Q08554 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DSC1Q08554 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
DSC1Q08554 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
DSC1Q08554 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
DSC1Q08554 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC19.25■□□□□ 0.67
DSC1Q08554 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.25■□□□□ 0.67
DSC1Q08554 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
DSC1Q08554 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
DSC1Q08554 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.25■□□□□ 0.67
DSC1Q08554 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
DSC1Q08554 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
DSC1Q08554 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
DSC1Q08554 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
DSC1Q08554 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.25■□□□□ 0.67
DSC1Q08554 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DSC1Q08554 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DSC1Q08554 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC19.25■□□□□ 0.67
DSC1Q08554 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC19.25■□□□□ 0.67
DSC1Q08554 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
DSC1Q08554 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DSC1Q08554 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC19.25■□□□□ 0.67
DSC1Q08554 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC19.25■□□□□ 0.67
DSC1Q08554 SCARNA2-201ENST00000458748 420 ntBASIC19.25■□□□□ 0.67
DSC1Q08554 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
DSC1Q08554 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
DSC1Q08554 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC19.25■□□□□ 0.67
DSC1Q08554 MIR7706-201ENST00000613747 67 ntBASIC19.25■□□□□ 0.67
DSC1Q08554 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC19.25■□□□□ 0.67
DSC1Q08554 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
DSC1Q08554 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
DSC1Q08554 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
DSC1Q08554 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
DSC1Q08554 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.25■□□□□ 0.67
DSC1Q08554 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
DSC1Q08554 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
DSC1Q08554 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC19.25■□□□□ 0.67
DSC1Q08554 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DSC1Q08554 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DSC1Q08554 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
DSC1Q08554 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DSC1Q08554 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.24■□□□□ 0.67
DSC1Q08554 PHGDH-209ENST00000641074 1780 ntBASIC19.24■□□□□ 0.67
DSC1Q08554 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
DSC1Q08554 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
DSC1Q08554 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
DSC1Q08554 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
DSC1Q08554 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC19.24■□□□□ 0.67
DSC1Q08554 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
DSC1Q08554 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC19.24■□□□□ 0.67
DSC1Q08554 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
DSC1Q08554 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
DSC1Q08554 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC19.24■□□□□ 0.67
DSC1Q08554 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DSC1Q08554 HNRNPDP1-201ENST00000439535 754 ntBASIC19.24■□□□□ 0.67
DSC1Q08554 AC073648.2-201ENST00000510116 352 ntBASIC19.24■□□□□ 0.67
DSC1Q08554 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC19.24■□□□□ 0.67
DSC1Q08554 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
DSC1Q08554 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
DSC1Q08554 AL049840.3-201ENST00000602669 611 ntBASIC19.24■□□□□ 0.67
DSC1Q08554 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC19.24■□□□□ 0.67
DSC1Q08554 FAM215A-202ENST00000632077 792 ntBASIC19.24■□□□□ 0.67
DSC1Q08554 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
DSC1Q08554 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.24■□□□□ 0.67
DSC1Q08554 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DSC1Q08554 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.24■□□□□ 0.67
DSC1Q08554 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.24■□□□□ 0.67
DSC1Q08554 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DSC1Q08554 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
DSC1Q08554 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DSC1Q08554 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DSC1Q08554 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms