Protein–RNA interactions for Protein: Q02742

GCNT1, Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCNT1Q02742 AC018470.1-201ENST00000624790 3129 ntBASIC19.43■□□□□ 0.7
GCNT1Q02742 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
GCNT1Q02742 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
GCNT1Q02742 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
GCNT1Q02742 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
GCNT1Q02742 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
GCNT1Q02742 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GCNT1Q02742 AC068880.1-201ENST00000507289 2297 ntBASIC19.42■□□□□ 0.7
GCNT1Q02742 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GCNT1Q02742 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GCNT1Q02742 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
GCNT1Q02742 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GCNT1Q02742 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GCNT1Q02742 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GCNT1Q02742 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GCNT1Q02742 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GCNT1Q02742 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GCNT1Q02742 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.42■□□□□ 0.7
GCNT1Q02742 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.42■□□□□ 0.7
GCNT1Q02742 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GCNT1Q02742 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GCNT1Q02742 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.42■□□□□ 0.7
GCNT1Q02742 DUX4L26-201ENST00000489078 1255 ntBASIC19.42■□□□□ 0.7
GCNT1Q02742 AC022616.7-201ENST00000525383 220 ntBASIC19.42■□□□□ 0.7
GCNT1Q02742 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
GCNT1Q02742 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
GCNT1Q02742 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GCNT1Q02742 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
GCNT1Q02742 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GCNT1Q02742 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.42■□□□□ 0.7
GCNT1Q02742 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GCNT1Q02742 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GCNT1Q02742 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GCNT1Q02742 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
GCNT1Q02742 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.42■□□□□ 0.7
GCNT1Q02742 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GCNT1Q02742 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
GCNT1Q02742 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GCNT1Q02742 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GCNT1Q02742 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GCNT1Q02742 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
GCNT1Q02742 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GCNT1Q02742 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
GCNT1Q02742 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GCNT1Q02742 KRT18P55-202ENST00000578578 1546 ntBASIC19.41■□□□□ 0.7
GCNT1Q02742 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.41■□□□□ 0.7
GCNT1Q02742 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GCNT1Q02742 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GCNT1Q02742 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
GCNT1Q02742 LINC00602-201ENST00000629776 2065 ntBASIC19.41■□□□□ 0.7
GCNT1Q02742 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GCNT1Q02742 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GCNT1Q02742 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.41■□□□□ 0.7
GCNT1Q02742 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GCNT1Q02742 MIR662-201ENST00000384847 95 ntBASIC19.41■□□□□ 0.7
GCNT1Q02742 KRT18P48-201ENST00000434763 852 ntBASIC19.41■□□□□ 0.7
GCNT1Q02742 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.41■□□□□ 0.7
GCNT1Q02742 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.41■□□□□ 0.7
GCNT1Q02742 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.41■□□□□ 0.7
GCNT1Q02742 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GCNT1Q02742 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.41■□□□□ 0.7
GCNT1Q02742 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GCNT1Q02742 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GCNT1Q02742 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GCNT1Q02742 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GCNT1Q02742 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GCNT1Q02742 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GCNT1Q02742 AL133373.2-201ENST00000623187 2828 ntBASIC19.41■□□□□ 0.7
GCNT1Q02742 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
GCNT1Q02742 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GCNT1Q02742 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.41■□□□□ 0.7
GCNT1Q02742 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.4■□□□□ 0.7
GCNT1Q02742 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GCNT1Q02742 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.4■□□□□ 0.7
GCNT1Q02742 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.4■□□□□ 0.7
GCNT1Q02742 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.4■□□□□ 0.7
GCNT1Q02742 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GCNT1Q02742 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
GCNT1Q02742 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GCNT1Q02742 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GCNT1Q02742 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.4■□□□□ 0.7
GCNT1Q02742 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GCNT1Q02742 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
GCNT1Q02742 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.4■□□□□ 0.7
GCNT1Q02742 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.4■□□□□ 0.7
GCNT1Q02742 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GCNT1Q02742 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
GCNT1Q02742 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.4■□□□□ 0.7
GCNT1Q02742 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.4■□□□□ 0.7
GCNT1Q02742 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GCNT1Q02742 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.4■□□□□ 0.7
GCNT1Q02742 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
GCNT1Q02742 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GCNT1Q02742 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
GCNT1Q02742 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
GCNT1Q02742 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GCNT1Q02742 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.4■□□□□ 0.7
GCNT1Q02742 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GCNT1Q02742 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GCNT1Q02742 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms