Protein–RNA interactions for Protein: P68366

TUBA4A, Tubulin alpha-4A chain, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4AP68366 KRT18P16-201ENST00000510337 1294 ntBASIC17.09■□□□□ 0.33
TUBA4AP68366 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.09■□□□□ 0.33
TUBA4AP68366 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.09■□□□□ 0.33
TUBA4AP68366 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.09■□□□□ 0.33
TUBA4AP68366 Z99916.2-201ENST00000604037 246 ntBASIC17.09■□□□□ 0.33
TUBA4AP68366 AP006294.2-201ENST00000641667 209 ntBASIC17.09■□□□□ 0.33
TUBA4AP68366 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.09■□□□□ 0.33
TUBA4AP68366 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBA4AP68366 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBA4AP68366 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TUBA4AP68366 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TUBA4AP68366 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBA4AP68366 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBA4AP68366 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBA4AP68366 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBA4AP68366 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBA4AP68366 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
TUBA4AP68366 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.09■□□□□ 0.33
TUBA4AP68366 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBA4AP68366 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
TUBA4AP68366 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.09■□□□□ 0.33
TUBA4AP68366 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TUBA4AP68366 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.09■□□□□ 0.33
TUBA4AP68366 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBA4AP68366 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TUBA4AP68366 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TUBA4AP68366 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TUBA4AP68366 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
TUBA4AP68366 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
TUBA4AP68366 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.08■□□□□ 0.33
TUBA4AP68366 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.33
TUBA4AP68366 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TUBA4AP68366 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TUBA4AP68366 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.33
TUBA4AP68366 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TUBA4AP68366 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.08■□□□□ 0.33
TUBA4AP68366 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TUBA4AP68366 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.08■□□□□ 0.33
TUBA4AP68366 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TUBA4AP68366 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.08■□□□□ 0.33
TUBA4AP68366 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TUBA4AP68366 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TUBA4AP68366 LINC01126-201ENST00000623515 1646 ntBASIC17.08■□□□□ 0.32
TUBA4AP68366 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
TUBA4AP68366 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
TUBA4AP68366 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.08■□□□□ 0.32
TUBA4AP68366 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.08■□□□□ 0.32
TUBA4AP68366 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
TUBA4AP68366 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.08■□□□□ 0.32
TUBA4AP68366 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TUBA4AP68366 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TUBA4AP68366 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TUBA4AP68366 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
TUBA4AP68366 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
TUBA4AP68366 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.08■□□□□ 0.32
TUBA4AP68366 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.08■□□□□ 0.32
TUBA4AP68366 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TUBA4AP68366 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.08■□□□□ 0.32
TUBA4AP68366 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TUBA4AP68366 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
TUBA4AP68366 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.08■□□□□ 0.32
TUBA4AP68366 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TUBA4AP68366 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TUBA4AP68366 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TUBA4AP68366 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
TUBA4AP68366 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
TUBA4AP68366 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TUBA4AP68366 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TUBA4AP68366 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TUBA4AP68366 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
TUBA4AP68366 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TUBA4AP68366 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TUBA4AP68366 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TUBA4AP68366 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
TUBA4AP68366 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TUBA4AP68366 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TUBA4AP68366 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
TUBA4AP68366 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
TUBA4AP68366 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TUBA4AP68366 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TUBA4AP68366 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
TUBA4AP68366 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.07■□□□□ 0.32
TUBA4AP68366 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.07■□□□□ 0.32
TUBA4AP68366 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.07■□□□□ 0.32
TUBA4AP68366 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TUBA4AP68366 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TUBA4AP68366 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TUBA4AP68366 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TUBA4AP68366 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TUBA4AP68366 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TUBA4AP68366 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TUBA4AP68366 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
TUBA4AP68366 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TUBA4AP68366 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.07■□□□□ 0.32
TUBA4AP68366 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.07■□□□□ 0.32
TUBA4AP68366 MYC-208ENST00000641036 567 ntBASIC17.07■□□□□ 0.32
TUBA4AP68366 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TUBA4AP68366 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TUBA4AP68366 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TUBA4AP68366 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms