Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
AP1S1P61966 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
AP1S1P61966 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
AP1S1P61966 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
AP1S1P61966 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
AP1S1P61966 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.28■□□□□ 0.52
AP1S1P61966 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.28■□□□□ 0.52
AP1S1P61966 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP1S1P61966 BICD1-207ENST00000551848 1962 ntBASIC18.28■□□□□ 0.52
AP1S1P61966 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.28■□□□□ 0.52
AP1S1P61966 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
AP1S1P61966 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP1S1P61966 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP1S1P61966 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.28■□□□□ 0.52
AP1S1P61966 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP1S1P61966 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
AP1S1P61966 GUSBP12-201ENST00000513727 720 ntBASIC18.28■□□□□ 0.52
AP1S1P61966 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
AP1S1P61966 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.28■□□□□ 0.52
AP1S1P61966 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
AP1S1P61966 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
AP1S1P61966 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP1S1P61966 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
AP1S1P61966 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP1S1P61966 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP1S1P61966 AC132938.6-201ENST00000623828 1655 ntBASIC18.28■□□□□ 0.52
AP1S1P61966 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
AP1S1P61966 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.28■□□□□ 0.52
AP1S1P61966 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP1S1P61966 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
AP1S1P61966 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.27■□□□□ 0.52
AP1S1P61966 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.27■□□□□ 0.52
AP1S1P61966 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
AP1S1P61966 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
AP1S1P61966 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
AP1S1P61966 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
AP1S1P61966 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
AP1S1P61966 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
AP1S1P61966 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
AP1S1P61966 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
AP1S1P61966 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
AP1S1P61966 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
AP1S1P61966 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
AP1S1P61966 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.27■□□□□ 0.52
AP1S1P61966 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.27■□□□□ 0.52
AP1S1P61966 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
AP1S1P61966 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
AP1S1P61966 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
AP1S1P61966 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
AP1S1P61966 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
AP1S1P61966 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
AP1S1P61966 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
AP1S1P61966 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
AP1S1P61966 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.27■□□□□ 0.51
AP1S1P61966 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
AP1S1P61966 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
AP1S1P61966 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.26■□□□□ 0.51
AP1S1P61966 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
AP1S1P61966 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.26■□□□□ 0.51
AP1S1P61966 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.26■□□□□ 0.51
AP1S1P61966 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
AP1S1P61966 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.26■□□□□ 0.51
AP1S1P61966 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
AP1S1P61966 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
AP1S1P61966 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
AP1S1P61966 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
AP1S1P61966 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
AP1S1P61966 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.26■□□□□ 0.51
AP1S1P61966 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.26■□□□□ 0.51
AP1S1P61966 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.26■□□□□ 0.51
AP1S1P61966 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
AP1S1P61966 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
AP1S1P61966 DUTP2-201ENST00000519164 463 ntBASIC18.26■□□□□ 0.51
AP1S1P61966 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.26■□□□□ 0.51
AP1S1P61966 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
AP1S1P61966 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
AP1S1P61966 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
AP1S1P61966 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.26■□□□□ 0.51
AP1S1P61966 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.26■□□□□ 0.51
AP1S1P61966 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
AP1S1P61966 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
AP1S1P61966 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.26■□□□□ 0.51
AP1S1P61966 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
AP1S1P61966 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
AP1S1P61966 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.25■□□□□ 0.51
AP1S1P61966 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.25■□□□□ 0.51
AP1S1P61966 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
AP1S1P61966 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
AP1S1P61966 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
AP1S1P61966 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
AP1S1P61966 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
AP1S1P61966 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
AP1S1P61966 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
AP1S1P61966 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
AP1S1P61966 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
AP1S1P61966 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
AP1S1P61966 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.25■□□□□ 0.51
AP1S1P61966 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
AP1S1P61966 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
AP1S1P61966 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms