Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC12.75□□□□□ -0.37
CKS1BP61024 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CKS1BP61024 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC12.75□□□□□ -0.37
CKS1BP61024 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CKS1BP61024 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CKS1BP61024 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC12.75□□□□□ -0.37
CKS1BP61024 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CKS1BP61024 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CKS1BP61024 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CKS1BP61024 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CKS1BP61024 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CKS1BP61024 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CKS1BP61024 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CKS1BP61024 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
CKS1BP61024 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CKS1BP61024 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
CKS1BP61024 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
CKS1BP61024 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC12.75□□□□□ -0.37
CKS1BP61024 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC12.75□□□□□ -0.37
CKS1BP61024 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC12.75□□□□□ -0.37
CKS1BP61024 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC12.75□□□□□ -0.37
CKS1BP61024 AF201337.1-201ENST00000520239 748 ntBASIC12.75□□□□□ -0.37
CKS1BP61024 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CKS1BP61024 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CKS1BP61024 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC12.75□□□□□ -0.37
CKS1BP61024 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC12.75□□□□□ -0.37
CKS1BP61024 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
CKS1BP61024 AC105036.2-201ENST00000569468 176 ntBASIC12.75□□□□□ -0.37
CKS1BP61024 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
CKS1BP61024 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CKS1BP61024 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC12.75□□□□□ -0.37
CKS1BP61024 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
CKS1BP61024 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CKS1BP61024 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CKS1BP61024 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CKS1BP61024 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC12.75□□□□□ -0.37
CKS1BP61024 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CKS1BP61024 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CKS1BP61024 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
CKS1BP61024 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CKS1BP61024 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CKS1BP61024 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CKS1BP61024 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC12.75□□□□□ -0.37
CKS1BP61024 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CKS1BP61024 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CKS1BP61024 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CKS1BP61024 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
CKS1BP61024 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CKS1BP61024 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC12.74□□□□□ -0.37
CKS1BP61024 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC12.74□□□□□ -0.37
CKS1BP61024 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CKS1BP61024 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
CKS1BP61024 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CKS1BP61024 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CKS1BP61024 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC12.74□□□□□ -0.37
CKS1BP61024 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC12.74□□□□□ -0.37
CKS1BP61024 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CKS1BP61024 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC12.74□□□□□ -0.37
CKS1BP61024 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
CKS1BP61024 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC12.74□□□□□ -0.37
CKS1BP61024 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
CKS1BP61024 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
CKS1BP61024 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CKS1BP61024 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CKS1BP61024 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CKS1BP61024 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC12.74□□□□□ -0.37
CKS1BP61024 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
CKS1BP61024 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC12.74□□□□□ -0.37
CKS1BP61024 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CKS1BP61024 RPS2P52-201ENST00000469610 820 ntBASIC12.74□□□□□ -0.37
CKS1BP61024 HES2-206ENST00000489730 730 ntTSL 2 BASIC12.74□□□□□ -0.37
CKS1BP61024 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC12.74□□□□□ -0.37
CKS1BP61024 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC12.74□□□□□ -0.37
CKS1BP61024 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC12.74□□□□□ -0.37
CKS1BP61024 AC080080.1-201ENST00000625121 2420 ntBASIC12.74□□□□□ -0.37
CKS1BP61024 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC12.74□□□□□ -0.37
CKS1BP61024 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CKS1BP61024 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC12.74□□□□□ -0.37
CKS1BP61024 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC12.74□□□□□ -0.37
CKS1BP61024 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CKS1BP61024 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CKS1BP61024 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
CKS1BP61024 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC12.74□□□□□ -0.37
CKS1BP61024 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
CKS1BP61024 UBQLN4P1-201ENST00000461599 1801 ntBASIC12.74□□□□□ -0.37
CKS1BP61024 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CKS1BP61024 NF2-208ENST00000403435 2568 ntTSL 5 BASIC12.74□□□□□ -0.37
CKS1BP61024 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CKS1BP61024 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CKS1BP61024 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CKS1BP61024 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CKS1BP61024 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CKS1BP61024 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CKS1BP61024 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CKS1BP61024 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CKS1BP61024 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CKS1BP61024 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CKS1BP61024 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CKS1BP61024 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CKS1BP61024 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms