Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC13.55□□□□□ -0.24
CMC4P56277 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC13.55□□□□□ -0.24
CMC4P56277 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC13.55□□□□□ -0.24
CMC4P56277 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CMC4P56277 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC13.55□□□□□ -0.24
CMC4P56277 AL445228.2-201ENST00000605589 952 ntBASIC13.55□□□□□ -0.24
CMC4P56277 AL121672.3-201ENST00000608644 468 ntBASIC13.55□□□□□ -0.24
CMC4P56277 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CMC4P56277 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC13.55□□□□□ -0.24
CMC4P56277 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CMC4P56277 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CMC4P56277 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CMC4P56277 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CMC4P56277 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CMC4P56277 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC13.55□□□□□ -0.24
CMC4P56277 AL499627.1-201ENST00000569373 2188 ntBASIC13.55□□□□□ -0.24
CMC4P56277 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
CMC4P56277 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC13.55□□□□□ -0.24
CMC4P56277 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CMC4P56277 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
CMC4P56277 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CMC4P56277 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC13.54□□□□□ -0.24
CMC4P56277 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
CMC4P56277 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC13.54□□□□□ -0.24
CMC4P56277 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CMC4P56277 AC090164.3-201ENST00000610780 2143 ntBASIC13.54□□□□□ -0.24
CMC4P56277 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CMC4P56277 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CMC4P56277 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CMC4P56277 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CMC4P56277 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CMC4P56277 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CMC4P56277 IGHGP-201ENST00000390555 1178 ntBASIC13.54□□□□□ -0.24
CMC4P56277 PCED1CP-201ENST00000419887 785 ntBASIC13.54□□□□□ -0.24
CMC4P56277 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC13.54□□□□□ -0.24
CMC4P56277 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CMC4P56277 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC13.54□□□□□ -0.24
CMC4P56277 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC13.54□□□□□ -0.24
CMC4P56277 FAM86EP-206ENST00000510506 987 ntBASIC13.54□□□□□ -0.24
CMC4P56277 KRT8P26-201ENST00000534154 1276 ntBASIC13.54□□□□□ -0.24
CMC4P56277 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CMC4P56277 TEN1-204ENST00000588202 862 ntTSL 3 BASIC13.54□□□□□ -0.24
CMC4P56277 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC13.54□□□□□ -0.24
CMC4P56277 AC011498.5-201ENST00000592027 486 ntBASIC13.54□□□□□ -0.24
CMC4P56277 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC13.54□□□□□ -0.24
CMC4P56277 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CMC4P56277 AC083849.1-201ENST00000615227 514 ntBASIC13.54□□□□□ -0.24
CMC4P56277 DFFB-212ENST00000625756 649 ntTSL 5 BASIC13.54□□□□□ -0.24
CMC4P56277 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC13.54□□□□□ -0.24
CMC4P56277 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CMC4P56277 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CMC4P56277 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
CMC4P56277 IER3-202ENST00000376377 1350 ntBASIC13.54□□□□□ -0.24
CMC4P56277 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
CMC4P56277 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CMC4P56277 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CMC4P56277 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CMC4P56277 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
CMC4P56277 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CMC4P56277 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CMC4P56277 AC126763.1-201ENST00000552015 2118 ntBASIC13.54□□□□□ -0.24
CMC4P56277 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC13.54□□□□□ -0.24
CMC4P56277 AC093503.3-201ENST00000624917 2352 ntBASIC13.53□□□□□ -0.24
CMC4P56277 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CMC4P56277 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CMC4P56277 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC13.53□□□□□ -0.24
CMC4P56277 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CMC4P56277 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC13.53□□□□□ -0.24
CMC4P56277 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CMC4P56277 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CMC4P56277 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CMC4P56277 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CMC4P56277 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CMC4P56277 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CMC4P56277 TSPY12P-201ENST00000421279 868 ntBASIC13.53□□□□□ -0.24
CMC4P56277 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC13.53□□□□□ -0.24
CMC4P56277 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CMC4P56277 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC13.53□□□□□ -0.24
CMC4P56277 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC13.53□□□□□ -0.24
CMC4P56277 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC13.53□□□□□ -0.24
CMC4P56277 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC13.53□□□□□ -0.24
CMC4P56277 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC13.53□□□□□ -0.24
CMC4P56277 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC13.53□□□□□ -0.24
CMC4P56277 AC005332.3-201ENST00000589904 676 ntBASIC13.53□□□□□ -0.24
CMC4P56277 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC13.53□□□□□ -0.24
CMC4P56277 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CMC4P56277 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CMC4P56277 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC13.53□□□□□ -0.24
CMC4P56277 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CMC4P56277 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC13.53□□□□□ -0.24
CMC4P56277 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CMC4P56277 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CMC4P56277 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CMC4P56277 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CMC4P56277 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CMC4P56277 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CMC4P56277 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CMC4P56277 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC13.53□□□□□ -0.24
CMC4P56277 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CMC4P56277 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms