Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 AC092865.7-201ENST00000641832 219 ntBASIC17.98■□□□□ 0.47
CDKN2DP55273 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDKN2DP55273 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDKN2DP55273 AC132938.6-201ENST00000623828 1655 ntBASIC17.98■□□□□ 0.47
CDKN2DP55273 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDKN2DP55273 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDKN2DP55273 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
CDKN2DP55273 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDKN2DP55273 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
CDKN2DP55273 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.97■□□□□ 0.47
CDKN2DP55273 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDKN2DP55273 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CDKN2DP55273 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDKN2DP55273 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDKN2DP55273 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDKN2DP55273 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CDKN2DP55273 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDKN2DP55273 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.97■□□□□ 0.47
CDKN2DP55273 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
CDKN2DP55273 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDKN2DP55273 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDKN2DP55273 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDKN2DP55273 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDKN2DP55273 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.97■□□□□ 0.47
CDKN2DP55273 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDKN2DP55273 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.97■□□□□ 0.47
CDKN2DP55273 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDKN2DP55273 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CDKN2DP55273 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.97■□□□□ 0.47
CDKN2DP55273 AC010203.1-204ENST00000548782 407 ntBASIC17.97■□□□□ 0.47
CDKN2DP55273 GCSHP2-201ENST00000560971 527 ntBASIC17.97■□□□□ 0.47
CDKN2DP55273 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CDKN2DP55273 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.97■□□□□ 0.47
CDKN2DP55273 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CDKN2DP55273 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDKN2DP55273 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CDKN2DP55273 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDKN2DP55273 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDKN2DP55273 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CDKN2DP55273 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDKN2DP55273 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDKN2DP55273 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.97■□□□□ 0.47
CDKN2DP55273 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDKN2DP55273 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDKN2DP55273 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDKN2DP55273 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CDKN2DP55273 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDKN2DP55273 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.97■□□□□ 0.47
CDKN2DP55273 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.96■□□□□ 0.47
CDKN2DP55273 LINC00896-202ENST00000609602 2128 ntBASIC17.96■□□□□ 0.47
CDKN2DP55273 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDKN2DP55273 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDKN2DP55273 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDKN2DP55273 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CDKN2DP55273 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDKN2DP55273 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.96■□□□□ 0.47
CDKN2DP55273 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.96■□□□□ 0.47
CDKN2DP55273 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.96■□□□□ 0.47
CDKN2DP55273 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDKN2DP55273 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDKN2DP55273 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDKN2DP55273 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
CDKN2DP55273 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.96■□□□□ 0.47
CDKN2DP55273 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDKN2DP55273 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CDKN2DP55273 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.96■□□□□ 0.47
CDKN2DP55273 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.96■□□□□ 0.47
CDKN2DP55273 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.96■□□□□ 0.47
CDKN2DP55273 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.96■□□□□ 0.47
CDKN2DP55273 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
CDKN2DP55273 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.96■□□□□ 0.47
CDKN2DP55273 AL023973.1-201ENST00000624619 620 ntBASIC17.96■□□□□ 0.47
CDKN2DP55273 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDKN2DP55273 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDKN2DP55273 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDKN2DP55273 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CDKN2DP55273 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDKN2DP55273 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDKN2DP55273 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDKN2DP55273 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDKN2DP55273 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
CDKN2DP55273 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.46
CDKN2DP55273 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CDKN2DP55273 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CDKN2DP55273 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CDKN2DP55273 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CDKN2DP55273 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.95■□□□□ 0.46
CDKN2DP55273 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDKN2DP55273 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CDKN2DP55273 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.95■□□□□ 0.46
CDKN2DP55273 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDKN2DP55273 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CDKN2DP55273 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CDKN2DP55273 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.95■□□□□ 0.46
CDKN2DP55273 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDKN2DP55273 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.95■□□□□ 0.46
CDKN2DP55273 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.95■□□□□ 0.46
CDKN2DP55273 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.95■□□□□ 0.46
CDKN2DP55273 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.95■□□□□ 0.46
CDKN2DP55273 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms