Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VCPP55072 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VCPP55072 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.46■□□□□ 0.71
VCPP55072 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VCPP55072 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.46■□□□□ 0.71
VCPP55072 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VCPP55072 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VCPP55072 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.46■□□□□ 0.71
VCPP55072 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VCPP55072 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VCPP55072 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC19.46■□□□□ 0.71
VCPP55072 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
VCPP55072 CHCHD2P8-201ENST00000429873 447 ntBASIC19.46■□□□□ 0.71
VCPP55072 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VCPP55072 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.46■□□□□ 0.71
VCPP55072 PENK-208ENST00000523051 772 ntTSL 5 BASIC19.46■□□□□ 0.71
VCPP55072 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VCPP55072 AL121912.1-201ENST00000603683 238 ntBASIC19.46■□□□□ 0.71
VCPP55072 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC19.46■□□□□ 0.71
VCPP55072 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.46■□□□□ 0.71
VCPP55072 AC020763.4-201ENST00000623414 4170 ntBASIC19.46■□□□□ 0.71
VCPP55072 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
VCPP55072 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VCPP55072 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VCPP55072 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VCPP55072 AC073592.3-201ENST00000625118 1834 ntBASIC19.46■□□□□ 0.71
VCPP55072 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VCPP55072 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
VCPP55072 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VCPP55072 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.46■□□□□ 0.71
VCPP55072 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VCPP55072 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.46■□□□□ 0.71
VCPP55072 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
VCPP55072 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.7
VCPP55072 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
VCPP55072 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VCPP55072 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
VCPP55072 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.45■□□□□ 0.7
VCPP55072 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
VCPP55072 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.45■□□□□ 0.7
VCPP55072 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC19.45■□□□□ 0.7
VCPP55072 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VCPP55072 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
VCPP55072 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.45■□□□□ 0.7
VCPP55072 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
VCPP55072 LINC00265-3P-201ENST00000447588 903 ntBASIC19.45■□□□□ 0.7
VCPP55072 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC19.45■□□□□ 0.7
VCPP55072 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.45■□□□□ 0.7
VCPP55072 AC092865.5-201ENST00000545435 363 ntBASIC19.45■□□□□ 0.7
VCPP55072 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC19.45■□□□□ 0.7
VCPP55072 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.45■□□□□ 0.7
VCPP55072 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
VCPP55072 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
VCPP55072 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VCPP55072 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VCPP55072 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VCPP55072 AC126763.1-201ENST00000552015 2118 ntBASIC19.45■□□□□ 0.7
VCPP55072 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
VCPP55072 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
VCPP55072 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VCPP55072 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VCPP55072 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
VCPP55072 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.44■□□□□ 0.7
VCPP55072 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
VCPP55072 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
VCPP55072 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
VCPP55072 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VCPP55072 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.44■□□□□ 0.7
VCPP55072 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
VCPP55072 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.44■□□□□ 0.7
VCPP55072 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VCPP55072 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VCPP55072 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VCPP55072 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VCPP55072 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VCPP55072 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VCPP55072 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
VCPP55072 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.44■□□□□ 0.7
VCPP55072 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
VCPP55072 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC19.44■□□□□ 0.7
VCPP55072 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC19.44■□□□□ 0.7
VCPP55072 TPSP2-201ENST00000561760 610 ntBASIC19.44■□□□□ 0.7
VCPP55072 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.44■□□□□ 0.7
VCPP55072 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
VCPP55072 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.44■□□□□ 0.7
VCPP55072 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.44■□□□□ 0.7
VCPP55072 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
VCPP55072 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
VCPP55072 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.44■□□□□ 0.7
VCPP55072 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.44■□□□□ 0.7
VCPP55072 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VCPP55072 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.44■□□□□ 0.7
VCPP55072 MTMR9LP-203ENST00000426597 1545 ntBASIC19.44■□□□□ 0.7
VCPP55072 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VCPP55072 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VCPP55072 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VCPP55072 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VCPP55072 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VCPP55072 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
VCPP55072 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms