Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NR1H2P55055 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NR1H2P55055 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NR1H2P55055 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NR1H2P55055 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
NR1H2P55055 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.27■□□□□ 0.36
NR1H2P55055 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.27■□□□□ 0.36
NR1H2P55055 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NR1H2P55055 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.27■□□□□ 0.36
NR1H2P55055 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NR1H2P55055 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NR1H2P55055 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
NR1H2P55055 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NR1H2P55055 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
NR1H2P55055 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
NR1H2P55055 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.27■□□□□ 0.36
NR1H2P55055 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.27■□□□□ 0.36
NR1H2P55055 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
NR1H2P55055 KRT18P21-201ENST00000515767 1272 ntBASIC17.27■□□□□ 0.36
NR1H2P55055 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.27■□□□□ 0.36
NR1H2P55055 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
NR1H2P55055 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.27■□□□□ 0.36
NR1H2P55055 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NR1H2P55055 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.27■□□□□ 0.36
NR1H2P55055 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
NR1H2P55055 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
NR1H2P55055 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.27■□□□□ 0.35
NR1H2P55055 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.27■□□□□ 0.35
NR1H2P55055 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
NR1H2P55055 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.27■□□□□ 0.35
NR1H2P55055 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
NR1H2P55055 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.27■□□□□ 0.35
NR1H2P55055 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NR1H2P55055 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
NR1H2P55055 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.26■□□□□ 0.35
NR1H2P55055 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.26■□□□□ 0.35
NR1H2P55055 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
NR1H2P55055 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NR1H2P55055 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
NR1H2P55055 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.26■□□□□ 0.35
NR1H2P55055 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
NR1H2P55055 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NR1H2P55055 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.26■□□□□ 0.35
NR1H2P55055 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NR1H2P55055 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.26■□□□□ 0.35
NR1H2P55055 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.26■□□□□ 0.35
NR1H2P55055 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.26■□□□□ 0.35
NR1H2P55055 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.26■□□□□ 0.35
NR1H2P55055 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NR1H2P55055 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NR1H2P55055 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
NR1H2P55055 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
NR1H2P55055 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NR1H2P55055 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
NR1H2P55055 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
NR1H2P55055 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NR1H2P55055 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NR1H2P55055 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.26■□□□□ 0.35
NR1H2P55055 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
NR1H2P55055 PP12613-201ENST00000424958 2230 ntBASIC17.25■□□□□ 0.35
NR1H2P55055 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NR1H2P55055 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NR1H2P55055 HTR7P1-201ENST00000538670 1336 ntBASIC17.25■□□□□ 0.35
NR1H2P55055 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
NR1H2P55055 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NR1H2P55055 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.25■□□□□ 0.35
NR1H2P55055 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
NR1H2P55055 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.25■□□□□ 0.35
NR1H2P55055 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NR1H2P55055 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NR1H2P55055 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NR1H2P55055 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NR1H2P55055 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NR1H2P55055 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NR1H2P55055 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NR1H2P55055 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
NR1H2P55055 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.25■□□□□ 0.35
NR1H2P55055 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NR1H2P55055 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NR1H2P55055 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NR1H2P55055 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.25■□□□□ 0.35
NR1H2P55055 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.25■□□□□ 0.35
NR1H2P55055 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
NR1H2P55055 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NR1H2P55055 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.25■□□□□ 0.35
NR1H2P55055 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NR1H2P55055 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NR1H2P55055 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
NR1H2P55055 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.25■□□□□ 0.35
NR1H2P55055 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
NR1H2P55055 CICP6-201ENST00000457191 2729 ntBASIC17.25■□□□□ 0.35
NR1H2P55055 AL121761.2-201ENST00000598007 1648 ntBASIC17.25■□□□□ 0.35
NR1H2P55055 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NR1H2P55055 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
NR1H2P55055 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.24■□□□□ 0.35
NR1H2P55055 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NR1H2P55055 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NR1H2P55055 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.24■□□□□ 0.35
NR1H2P55055 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
NR1H2P55055 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms