Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GPC3P51654 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
GPC3P51654 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GPC3P51654 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC20.06■□□□□ 0.8
GPC3P51654 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GPC3P51654 IGHV3-47-201ENST00000425060 335 ntBASIC20.06■□□□□ 0.8
GPC3P51654 KRT17P6-201ENST00000453795 1220 ntBASIC20.06■□□□□ 0.8
GPC3P51654 AC091607.1-201ENST00000490318 1060 ntBASIC20.06■□□□□ 0.8
GPC3P51654 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
GPC3P51654 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GPC3P51654 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC20.06■□□□□ 0.8
GPC3P51654 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC20.06■□□□□ 0.8
GPC3P51654 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
GPC3P51654 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC20.06■□□□□ 0.8
GPC3P51654 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.06■□□□□ 0.8
GPC3P51654 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
GPC3P51654 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
GPC3P51654 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GPC3P51654 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
GPC3P51654 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GPC3P51654 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
GPC3P51654 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.06■□□□□ 0.8
GPC3P51654 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
GPC3P51654 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GPC3P51654 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
GPC3P51654 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
GPC3P51654 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
GPC3P51654 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GPC3P51654 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GPC3P51654 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
GPC3P51654 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GPC3P51654 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
GPC3P51654 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC20.05■□□□□ 0.8
GPC3P51654 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
GPC3P51654 IFNL4P1-201ENST00000607083 540 ntBASIC20.05■□□□□ 0.8
GPC3P51654 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC20.05■□□□□ 0.8
GPC3P51654 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
GPC3P51654 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.05■□□□□ 0.8
GPC3P51654 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
GPC3P51654 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GPC3P51654 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC20.05■□□□□ 0.8
GPC3P51654 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GPC3P51654 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GPC3P51654 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
GPC3P51654 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GPC3P51654 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GPC3P51654 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.04■□□□□ 0.8
GPC3P51654 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
GPC3P51654 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GPC3P51654 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GPC3P51654 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
GPC3P51654 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GPC3P51654 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.04■□□□□ 0.8
GPC3P51654 AC026396.1-201ENST00000419388 421 ntBASIC20.04■□□□□ 0.8
GPC3P51654 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC20.04■□□□□ 0.8
GPC3P51654 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.04■□□□□ 0.8
GPC3P51654 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
GPC3P51654 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC20.04■□□□□ 0.8
GPC3P51654 AL121772.3-201ENST00000610840 674 ntBASIC20.04■□□□□ 0.8
GPC3P51654 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC20.04■□□□□ 0.8
GPC3P51654 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC20.04■□□□□ 0.8
GPC3P51654 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GPC3P51654 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
GPC3P51654 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GPC3P51654 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GPC3P51654 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
GPC3P51654 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GPC3P51654 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
GPC3P51654 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
GPC3P51654 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GPC3P51654 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.04■□□□□ 0.8
GPC3P51654 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GPC3P51654 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
GPC3P51654 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GPC3P51654 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.04■□□□□ 0.8
GPC3P51654 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GPC3P51654 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
GPC3P51654 LINC01126-201ENST00000623515 1646 ntBASIC20.03■□□□□ 0.8
GPC3P51654 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
GPC3P51654 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
GPC3P51654 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.03■□□□□ 0.8
GPC3P51654 AC246785.2-201ENST00000432512 513 ntBASIC20.03■□□□□ 0.8
GPC3P51654 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC20.03■□□□□ 0.8
GPC3P51654 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC20.03■□□□□ 0.8
GPC3P51654 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC20.03■□□□□ 0.8
GPC3P51654 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC20.03■□□□□ 0.8
GPC3P51654 KRT18P31-201ENST00000506277 1292 ntBASIC20.03■□□□□ 0.8
GPC3P51654 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
GPC3P51654 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC20.03■□□□□ 0.8
GPC3P51654 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
GPC3P51654 AL353801.3-201ENST00000609898 542 ntBASIC20.03■□□□□ 0.8
GPC3P51654 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
GPC3P51654 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
GPC3P51654 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC20.03■□□□□ 0.8
GPC3P51654 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
GPC3P51654 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GPC3P51654 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.03■□□□□ 0.8
GPC3P51654 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
GPC3P51654 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GPC3P51654 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms