Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TUBP50607 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TUBP50607 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
TUBP50607 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TUBP50607 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TUBP50607 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC19.13■□□□□ 0.65
TUBP50607 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TUBP50607 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
TUBP50607 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TUBP50607 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TUBP50607 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TUBP50607 AP002383.4-201ENST00000442518 975 ntBASIC19.13■□□□□ 0.65
TUBP50607 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.13■□□□□ 0.65
TUBP50607 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.13■□□□□ 0.65
TUBP50607 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.13■□□□□ 0.65
TUBP50607 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.13■□□□□ 0.65
TUBP50607 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
TUBP50607 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
TUBP50607 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.13■□□□□ 0.65
TUBP50607 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.13■□□□□ 0.65
TUBP50607 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.13■□□□□ 0.65
TUBP50607 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.13■□□□□ 0.65
TUBP50607 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.13■□□□□ 0.65
TUBP50607 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TUBP50607 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TUBP50607 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TUBP50607 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TUBP50607 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TUBP50607 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TUBP50607 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TUBP50607 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TUBP50607 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.13■□□□□ 0.65
TUBP50607 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TUBP50607 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
TUBP50607 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TUBP50607 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TUBP50607 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
TUBP50607 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TUBP50607 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TUBP50607 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TUBP50607 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TUBP50607 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
TUBP50607 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TUBP50607 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TUBP50607 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TUBP50607 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TUBP50607 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.12■□□□□ 0.65
TUBP50607 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TUBP50607 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TUBP50607 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.12■□□□□ 0.65
TUBP50607 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.12■□□□□ 0.65
TUBP50607 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
TUBP50607 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TUBP50607 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.12■□□□□ 0.65
TUBP50607 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TUBP50607 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TUBP50607 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.12■□□□□ 0.65
TUBP50607 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.12■□□□□ 0.65
TUBP50607 MIR3180-1-201ENST00000580374 94 ntBASIC19.12■□□□□ 0.65
TUBP50607 MIR3180-3-201ENST00000584616 94 ntBASIC19.12■□□□□ 0.65
TUBP50607 AC092329.2-201ENST00000598402 547 ntBASIC19.12■□□□□ 0.65
TUBP50607 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TUBP50607 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.12■□□□□ 0.65
TUBP50607 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TUBP50607 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TUBP50607 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
TUBP50607 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
TUBP50607 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TUBP50607 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
TUBP50607 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TUBP50607 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.11■□□□□ 0.65
TUBP50607 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
TUBP50607 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
TUBP50607 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TUBP50607 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TUBP50607 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TUBP50607 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TUBP50607 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TUBP50607 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TUBP50607 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TUBP50607 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.11■□□□□ 0.65
TUBP50607 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TUBP50607 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TUBP50607 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TUBP50607 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.11■□□□□ 0.65
TUBP50607 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TUBP50607 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
TUBP50607 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TUBP50607 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.11■□□□□ 0.65
TUBP50607 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.11■□□□□ 0.65
TUBP50607 DRAXINP1-201ENST00000437611 948 ntBASIC19.11■□□□□ 0.65
TUBP50607 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.11■□□□□ 0.65
TUBP50607 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.11■□□□□ 0.65
TUBP50607 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.11■□□□□ 0.65
TUBP50607 AC090616.6-201ENST00000582640 721 ntBASIC19.11■□□□□ 0.65
TUBP50607 AC092119.3-201ENST00000612618 583 ntBASIC19.11■□□□□ 0.65
TUBP50607 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.11■□□□□ 0.65
TUBP50607 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.11■□□□□ 0.65
TUBP50607 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TUBP50607 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms