Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.17■□□□□ 0.18
SRP9P49458 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SRP9P49458 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SRP9P49458 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SRP9P49458 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SRP9P49458 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.17■□□□□ 0.18
SRP9P49458 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SRP9P49458 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SRP9P49458 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.17■□□□□ 0.18
SRP9P49458 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SRP9P49458 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SRP9P49458 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SRP9P49458 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SRP9P49458 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.17■□□□□ 0.18
SRP9P49458 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SRP9P49458 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.16■□□□□ 0.18
SRP9P49458 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SRP9P49458 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SRP9P49458 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SRP9P49458 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SRP9P49458 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.16■□□□□ 0.18
SRP9P49458 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SRP9P49458 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.16■□□□□ 0.18
SRP9P49458 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.16■□□□□ 0.18
SRP9P49458 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SRP9P49458 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.16■□□□□ 0.18
SRP9P49458 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.16■□□□□ 0.18
SRP9P49458 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SRP9P49458 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.16■□□□□ 0.18
SRP9P49458 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
SRP9P49458 MIR1238-201ENST00000408483 83 ntBASIC16.16■□□□□ 0.18
SRP9P49458 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.16■□□□□ 0.18
SRP9P49458 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.16■□□□□ 0.18
SRP9P49458 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SRP9P49458 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SRP9P49458 FITM1-202ENST00000559294 800 ntBASIC16.16■□□□□ 0.18
SRP9P49458 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.16■□□□□ 0.18
SRP9P49458 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SRP9P49458 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
SRP9P49458 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.16■□□□□ 0.18
SRP9P49458 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SRP9P49458 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.16■□□□□ 0.18
SRP9P49458 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.16■□□□□ 0.18
SRP9P49458 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SRP9P49458 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SRP9P49458 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SRP9P49458 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC16.16■□□□□ 0.18
SRP9P49458 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SRP9P49458 AC108860.2-201ENST00000562760 2183 ntBASIC16.16■□□□□ 0.18
SRP9P49458 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SRP9P49458 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SRP9P49458 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.15■□□□□ 0.18
SRP9P49458 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SRP9P49458 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
SRP9P49458 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SRP9P49458 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SRP9P49458 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SRP9P49458 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SRP9P49458 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SRP9P49458 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.15■□□□□ 0.18
SRP9P49458 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SRP9P49458 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SRP9P49458 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
SRP9P49458 MMP23A-201ENST00000234610 1017 ntBASIC16.15■□□□□ 0.18
SRP9P49458 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SRP9P49458 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
SRP9P49458 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.15■□□□□ 0.18
SRP9P49458 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
SRP9P49458 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC16.15■□□□□ 0.18
SRP9P49458 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.15■□□□□ 0.18
SRP9P49458 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SRP9P49458 C2orf69P3-201ENST00000565542 1120 ntBASIC16.15■□□□□ 0.18
SRP9P49458 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.15■□□□□ 0.18
SRP9P49458 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SRP9P49458 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SRP9P49458 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SRP9P49458 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SRP9P49458 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.15■□□□□ 0.18
SRP9P49458 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SRP9P49458 PKD1P1-201ENST00000458669 6805 ntBASIC16.15■□□□□ 0.18
SRP9P49458 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.15■□□□□ 0.18
SRP9P49458 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SRP9P49458 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
SRP9P49458 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.15■□□□□ 0.18
SRP9P49458 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.18
SRP9P49458 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
SRP9P49458 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.18
SRP9P49458 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
SRP9P49458 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SRP9P49458 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.14■□□□□ 0.17
SRP9P49458 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SRP9P49458 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SRP9P49458 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.14■□□□□ 0.17
SRP9P49458 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SRP9P49458 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
SRP9P49458 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SRP9P49458 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SRP9P49458 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.14■□□□□ 0.17
SRP9P49458 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SRP9P49458 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms