Protein–RNA interactions for Protein: P48058

GRIA4, Glutamate receptor 4, humanhuman

Predictions only

Length 902 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA4P48058 AC024243.1-201ENST00000609234 778 ntBASIC18.63■□□□□ 0.57
GRIA4P48058 AC092119.3-201ENST00000612618 583 ntBASIC18.63■□□□□ 0.57
GRIA4P48058 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GRIA4P48058 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
GRIA4P48058 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
GRIA4P48058 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GRIA4P48058 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GRIA4P48058 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GRIA4P48058 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GRIA4P48058 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GRIA4P48058 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GRIA4P48058 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GRIA4P48058 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GRIA4P48058 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GRIA4P48058 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.62■□□□□ 0.57
GRIA4P48058 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GRIA4P48058 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GRIA4P48058 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GRIA4P48058 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
GRIA4P48058 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GRIA4P48058 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.62■□□□□ 0.57
GRIA4P48058 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.62■□□□□ 0.57
GRIA4P48058 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
GRIA4P48058 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.62■□□□□ 0.57
GRIA4P48058 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.62■□□□□ 0.57
GRIA4P48058 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.62■□□□□ 0.57
GRIA4P48058 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.62■□□□□ 0.57
GRIA4P48058 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
GRIA4P48058 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.62■□□□□ 0.57
GRIA4P48058 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GRIA4P48058 AL121672.3-201ENST00000608644 468 ntBASIC18.62■□□□□ 0.57
GRIA4P48058 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.62■□□□□ 0.57
GRIA4P48058 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GRIA4P48058 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.62■□□□□ 0.57
GRIA4P48058 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.62■□□□□ 0.57
GRIA4P48058 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GRIA4P48058 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
GRIA4P48058 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
GRIA4P48058 NOC2LP1-202ENST00000452600 2235 ntBASIC18.62■□□□□ 0.57
GRIA4P48058 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
GRIA4P48058 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GRIA4P48058 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
GRIA4P48058 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
GRIA4P48058 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.61■□□□□ 0.57
GRIA4P48058 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.61■□□□□ 0.57
GRIA4P48058 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.61■□□□□ 0.57
GRIA4P48058 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GRIA4P48058 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GRIA4P48058 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GRIA4P48058 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GRIA4P48058 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GRIA4P48058 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
GRIA4P48058 TSSC2-201ENST00000450217 709 ntBASIC18.61■□□□□ 0.57
GRIA4P48058 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.61■□□□□ 0.57
GRIA4P48058 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.61■□□□□ 0.57
GRIA4P48058 AC009065.1-201ENST00000564055 1225 ntBASIC18.61■□□□□ 0.57
GRIA4P48058 MIR3652-201ENST00000579335 131 ntBASIC18.61■□□□□ 0.57
GRIA4P48058 AC011498.5-201ENST00000592027 486 ntBASIC18.61■□□□□ 0.57
GRIA4P48058 AC092329.2-201ENST00000598402 547 ntBASIC18.61■□□□□ 0.57
GRIA4P48058 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.61■□□□□ 0.57
GRIA4P48058 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.61■□□□□ 0.57
GRIA4P48058 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
GRIA4P48058 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GRIA4P48058 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GRIA4P48058 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GRIA4P48058 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
GRIA4P48058 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GRIA4P48058 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GRIA4P48058 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GRIA4P48058 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GRIA4P48058 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
GRIA4P48058 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.6■□□□□ 0.57
GRIA4P48058 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
GRIA4P48058 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.6■□□□□ 0.57
GRIA4P48058 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.6■□□□□ 0.57
GRIA4P48058 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.6■□□□□ 0.57
GRIA4P48058 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GRIA4P48058 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
GRIA4P48058 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GRIA4P48058 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GRIA4P48058 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.6■□□□□ 0.57
GRIA4P48058 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GRIA4P48058 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.6■□□□□ 0.57
GRIA4P48058 BX276092.5-203ENST00000456199 560 ntBASIC18.6■□□□□ 0.57
GRIA4P48058 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.6■□□□□ 0.57
GRIA4P48058 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.6■□□□□ 0.57
GRIA4P48058 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.6■□□□□ 0.57
GRIA4P48058 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.6■□□□□ 0.57
GRIA4P48058 AC010240.3-201ENST00000607688 395 ntBASIC18.6■□□□□ 0.57
GRIA4P48058 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.6■□□□□ 0.57
GRIA4P48058 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
GRIA4P48058 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GRIA4P48058 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GRIA4P48058 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GRIA4P48058 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GRIA4P48058 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GRIA4P48058 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.6■□□□□ 0.57
GRIA4P48058 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
GRIA4P48058 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GRIA4P48058 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms