Protein–RNA interactions for Protein: P41219

PRPH, Peripherin, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPHP41219 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRPHP41219 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
PRPHP41219 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
PRPHP41219 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
PRPHP41219 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRPHP41219 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRPHP41219 HES2-202ENST00000377836 507 ntTSL 2 BASIC20.54■□□□□ 0.88
PRPHP41219 DUTP2-201ENST00000519164 463 ntBASIC20.54■□□□□ 0.88
PRPHP41219 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC20.54■□□□□ 0.88
PRPHP41219 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC20.54■□□□□ 0.88
PRPHP41219 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20.54■□□□□ 0.88
PRPHP41219 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC20.54■□□□□ 0.88
PRPHP41219 TEN1-204ENST00000588202 862 ntTSL 3 BASIC20.54■□□□□ 0.88
PRPHP41219 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.54■□□□□ 0.88
PRPHP41219 HYMAI.1-201ENST00000620949 238 ntBASIC20.54■□□□□ 0.88
PRPHP41219 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC20.54■□□□□ 0.88
PRPHP41219 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC20.54■□□□□ 0.88
PRPHP41219 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRPHP41219 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.54■□□□□ 0.88
PRPHP41219 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC20.54■□□□□ 0.88
PRPHP41219 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PRPHP41219 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
PRPHP41219 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRPHP41219 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC20.54■□□□□ 0.88
PRPHP41219 AC132938.6-201ENST00000623828 1655 ntBASIC20.54■□□□□ 0.88
PRPHP41219 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRPHP41219 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC20.54■□□□□ 0.88
PRPHP41219 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PRPHP41219 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC20.54■□□□□ 0.88
PRPHP41219 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC20.53■□□□□ 0.88
PRPHP41219 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC20.53■□□□□ 0.88
PRPHP41219 LINC00167-201ENST00000530583 1419 ntBASIC20.53■□□□□ 0.88
PRPHP41219 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRPHP41219 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC20.53■□□□□ 0.88
PRPHP41219 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PRPHP41219 NOC2LP2-201ENST00000407594 1944 ntBASIC20.53■□□□□ 0.88
PRPHP41219 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC20.53■□□□□ 0.88
PRPHP41219 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRPHP41219 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRPHP41219 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRPHP41219 HBZP1-201ENST00000354915 429 ntBASIC20.53■□□□□ 0.88
PRPHP41219 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRPHP41219 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PRPHP41219 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC20.53■□□□□ 0.88
PRPHP41219 AC092597.1-201ENST00000487352 616 ntBASIC20.53■□□□□ 0.88
PRPHP41219 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC20.53■□□□□ 0.88
PRPHP41219 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC20.53■□□□□ 0.88
PRPHP41219 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
PRPHP41219 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC20.53■□□□□ 0.88
PRPHP41219 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.53■□□□□ 0.88
PRPHP41219 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRPHP41219 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRPHP41219 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
PRPHP41219 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRPHP41219 CD276-201ENST00000318424 2738 ntTSL 5 BASIC20.53■□□□□ 0.88
PRPHP41219 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PRPHP41219 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
PRPHP41219 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC20.53■□□□□ 0.88
PRPHP41219 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC20.53■□□□□ 0.88
PRPHP41219 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRPHP41219 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRPHP41219 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRPHP41219 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PRPHP41219 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PRPHP41219 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC20.52■□□□□ 0.88
PRPHP41219 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PRPHP41219 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PRPHP41219 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC20.52■□□□□ 0.88
PRPHP41219 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC20.52■□□□□ 0.88
PRPHP41219 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PRPHP41219 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
PRPHP41219 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC20.52■□□□□ 0.88
PRPHP41219 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC20.52■□□□□ 0.88
PRPHP41219 TMPOP1-202ENST00000424642 1267 ntBASIC20.52■□□□□ 0.88
PRPHP41219 AL359075.1-203ENST00000462729 1002 ntBASIC20.52■□□□□ 0.88
PRPHP41219 DUX4L26-201ENST00000489078 1255 ntBASIC20.52■□□□□ 0.88
PRPHP41219 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.52■□□□□ 0.88
PRPHP41219 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC20.52■□□□□ 0.88
PRPHP41219 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC20.52■□□□□ 0.88
PRPHP41219 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC20.52■□□□□ 0.88
PRPHP41219 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC20.52■□□□□ 0.88
PRPHP41219 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC20.52■□□□□ 0.88
PRPHP41219 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC20.52■□□□□ 0.88
PRPHP41219 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PRPHP41219 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PRPHP41219 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PRPHP41219 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PRPHP41219 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
PRPHP41219 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PRPHP41219 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
PRPHP41219 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
PRPHP41219 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.52■□□□□ 0.87
PRPHP41219 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
PRPHP41219 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRPHP41219 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC20.51■□□□□ 0.87
PRPHP41219 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRPHP41219 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRPHP41219 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
PRPHP41219 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
PRPHP41219 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms