Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PTPN7P35236 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN7P35236 MMP23A-201ENST00000234610 1017 ntBASIC18.81■□□□□ 0.6
PTPN7P35236 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN7P35236 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN7P35236 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN7P35236 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
PTPN7P35236 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN7P35236 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.81■□□□□ 0.6
PTPN7P35236 MIR3917-201ENST00000580971 93 ntBASIC18.81■□□□□ 0.6
PTPN7P35236 AC008687.5-201ENST00000593746 558 ntBASIC18.81■□□□□ 0.6
PTPN7P35236 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN7P35236 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN7P35236 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN7P35236 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN7P35236 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.81■□□□□ 0.6
PTPN7P35236 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
PTPN7P35236 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN7P35236 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.81■□□□□ 0.6
PTPN7P35236 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
PTPN7P35236 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.81■□□□□ 0.6
PTPN7P35236 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN7P35236 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN7P35236 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN7P35236 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.81■□□□□ 0.6
PTPN7P35236 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.8■□□□□ 0.6
PTPN7P35236 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.8■□□□□ 0.6
PTPN7P35236 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
PTPN7P35236 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN7P35236 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PTPN7P35236 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN7P35236 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN7P35236 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN7P35236 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN7P35236 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN7P35236 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN7P35236 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.8■□□□□ 0.6
PTPN7P35236 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN7P35236 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.8■□□□□ 0.6
PTPN7P35236 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.8■□□□□ 0.6
PTPN7P35236 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
PTPN7P35236 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.8■□□□□ 0.6
PTPN7P35236 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN7P35236 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.8■□□□□ 0.6
PTPN7P35236 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.8■□□□□ 0.6
PTPN7P35236 AC024243.1-201ENST00000609234 778 ntBASIC18.8■□□□□ 0.6
PTPN7P35236 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN7P35236 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN7P35236 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN7P35236 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN7P35236 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
PTPN7P35236 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTPN7P35236 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
PTPN7P35236 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PTPN7P35236 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
PTPN7P35236 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN7P35236 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN7P35236 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN7P35236 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN7P35236 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN7P35236 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
PTPN7P35236 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN7P35236 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN7P35236 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN7P35236 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PTPN7P35236 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN7P35236 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN7P35236 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN7P35236 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.79■□□□□ 0.6
PTPN7P35236 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN7P35236 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.79■□□□□ 0.6
PTPN7P35236 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.79■□□□□ 0.6
PTPN7P35236 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.79■□□□□ 0.6
PTPN7P35236 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.79■□□□□ 0.6
PTPN7P35236 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.79■□□□□ 0.6
PTPN7P35236 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
PTPN7P35236 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.79■□□□□ 0.6
PTPN7P35236 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.79■□□□□ 0.6
PTPN7P35236 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN7P35236 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN7P35236 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN7P35236 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN7P35236 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.79■□□□□ 0.6
PTPN7P35236 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN7P35236 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN7P35236 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
PTPN7P35236 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
PTPN7P35236 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN7P35236 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.79■□□□□ 0.6
PTPN7P35236 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PTPN7P35236 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.79■□□□□ 0.6
PTPN7P35236 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.79■□□□□ 0.6
PTPN7P35236 AC012317.2-201ENST00000623305 2251 ntBASIC18.79■□□□□ 0.6
PTPN7P35236 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
PTPN7P35236 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN7P35236 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN7P35236 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN7P35236 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
PTPN7P35236 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN7P35236 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms