Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
GPC1P35052 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.29■□□□□ 0.36
GPC1P35052 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GPC1P35052 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GPC1P35052 INGX-201ENST00000359239 846 ntBASIC17.29■□□□□ 0.36
GPC1P35052 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.29■□□□□ 0.36
GPC1P35052 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
GPC1P35052 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GPC1P35052 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GPC1P35052 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.29■□□□□ 0.36
GPC1P35052 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.29■□□□□ 0.36
GPC1P35052 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.29■□□□□ 0.36
GPC1P35052 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GPC1P35052 AC066615.1-201ENST00000640911 628 ntBASIC17.29■□□□□ 0.36
GPC1P35052 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GPC1P35052 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.29■□□□□ 0.36
GPC1P35052 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.29■□□□□ 0.36
GPC1P35052 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GPC1P35052 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.29■□□□□ 0.36
GPC1P35052 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GPC1P35052 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
GPC1P35052 NOC2LP1-202ENST00000452600 2235 ntBASIC17.29■□□□□ 0.36
GPC1P35052 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
GPC1P35052 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
GPC1P35052 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
GPC1P35052 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
GPC1P35052 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.29■□□□□ 0.36
GPC1P35052 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
GPC1P35052 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GPC1P35052 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.29■□□□□ 0.36
GPC1P35052 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.28■□□□□ 0.36
GPC1P35052 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
GPC1P35052 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GPC1P35052 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GPC1P35052 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
GPC1P35052 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
GPC1P35052 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GPC1P35052 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
GPC1P35052 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
GPC1P35052 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.28■□□□□ 0.36
GPC1P35052 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GPC1P35052 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GPC1P35052 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GPC1P35052 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GPC1P35052 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
GPC1P35052 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.28■□□□□ 0.36
GPC1P35052 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
GPC1P35052 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
GPC1P35052 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.28■□□□□ 0.36
GPC1P35052 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GPC1P35052 ECEL1P2-202ENST00000465689 757 ntBASIC17.28■□□□□ 0.36
GPC1P35052 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.28■□□□□ 0.36
GPC1P35052 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.28■□□□□ 0.36
GPC1P35052 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GPC1P35052 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.28■□□□□ 0.36
GPC1P35052 AL512604.3-201ENST00000569583 964 ntBASIC17.28■□□□□ 0.36
GPC1P35052 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.28■□□□□ 0.36
GPC1P35052 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
GPC1P35052 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.28■□□□□ 0.36
GPC1P35052 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.28■□□□□ 0.36
GPC1P35052 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GPC1P35052 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GPC1P35052 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
GPC1P35052 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.28■□□□□ 0.36
GPC1P35052 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.28■□□□□ 0.36
GPC1P35052 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.28■□□□□ 0.36
GPC1P35052 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
GPC1P35052 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GPC1P35052 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GPC1P35052 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.28■□□□□ 0.36
GPC1P35052 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GPC1P35052 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GPC1P35052 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.28■□□□□ 0.36
GPC1P35052 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
GPC1P35052 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GPC1P35052 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.27■□□□□ 0.36
GPC1P35052 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.27■□□□□ 0.36
GPC1P35052 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GPC1P35052 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
GPC1P35052 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.27■□□□□ 0.36
GPC1P35052 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.27■□□□□ 0.36
GPC1P35052 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
GPC1P35052 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
GPC1P35052 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GPC1P35052 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.27■□□□□ 0.36
GPC1P35052 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GPC1P35052 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
GPC1P35052 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.27■□□□□ 0.36
GPC1P35052 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
GPC1P35052 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.27■□□□□ 0.36
GPC1P35052 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.27■□□□□ 0.36
GPC1P35052 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.27■□□□□ 0.36
GPC1P35052 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GPC1P35052 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
GPC1P35052 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
GPC1P35052 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
GPC1P35052 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.27■□□□□ 0.36
GPC1P35052 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.27■□□□□ 0.35
GPC1P35052 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
GPC1P35052 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms