Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SLC6A4P31645 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.63■□□□□ 0.57
SLC6A4P31645 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC6A4P31645 KRT126P-201ENST00000549467 1181 ntBASIC18.63■□□□□ 0.57
SLC6A4P31645 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.63■□□□□ 0.57
SLC6A4P31645 AC012615.1-201ENST00000565797 1299 ntBASIC18.63■□□□□ 0.57
SLC6A4P31645 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.63■□□□□ 0.57
SLC6A4P31645 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
SLC6A4P31645 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.63■□□□□ 0.57
SLC6A4P31645 AC090164.3-201ENST00000610780 2143 ntBASIC18.63■□□□□ 0.57
SLC6A4P31645 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.63■□□□□ 0.57
SLC6A4P31645 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.63■□□□□ 0.57
SLC6A4P31645 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC6A4P31645 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.63■□□□□ 0.57
SLC6A4P31645 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SLC6A4P31645 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC6A4P31645 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.63■□□□□ 0.57
SLC6A4P31645 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SLC6A4P31645 AC093010.1-201ENST00000473625 1624 ntBASIC18.63■□□□□ 0.57
SLC6A4P31645 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC6A4P31645 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.63■□□□□ 0.57
SLC6A4P31645 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.63■□□□□ 0.57
SLC6A4P31645 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SLC6A4P31645 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC6A4P31645 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC6A4P31645 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC6A4P31645 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC6A4P31645 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SLC6A4P31645 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SLC6A4P31645 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC6A4P31645 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.62■□□□□ 0.57
SLC6A4P31645 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SLC6A4P31645 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SLC6A4P31645 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC6A4P31645 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.62■□□□□ 0.57
SLC6A4P31645 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC6A4P31645 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC6A4P31645 IGHV3-47-201ENST00000425060 335 ntBASIC18.62■□□□□ 0.57
SLC6A4P31645 KRT17P6-201ENST00000453795 1220 ntBASIC18.62■□□□□ 0.57
SLC6A4P31645 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.62■□□□□ 0.57
SLC6A4P31645 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.62■□□□□ 0.57
SLC6A4P31645 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SLC6A4P31645 PRELID1P1-202ENST00000567272 903 ntBASIC18.62■□□□□ 0.57
SLC6A4P31645 AC011840.4-201ENST00000578471 627 ntBASIC18.62■□□□□ 0.57
SLC6A4P31645 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SLC6A4P31645 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SLC6A4P31645 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SLC6A4P31645 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC6A4P31645 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.62■□□□□ 0.57
SLC6A4P31645 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC6A4P31645 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
SLC6A4P31645 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC6A4P31645 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC6A4P31645 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
SLC6A4P31645 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC6A4P31645 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SLC6A4P31645 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.61■□□□□ 0.57
SLC6A4P31645 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SLC6A4P31645 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
SLC6A4P31645 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.61■□□□□ 0.57
SLC6A4P31645 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.61■□□□□ 0.57
SLC6A4P31645 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC6A4P31645 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.61■□□□□ 0.57
SLC6A4P31645 KRT18P65-201ENST00000439811 1286 ntBASIC18.61■□□□□ 0.57
SLC6A4P31645 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SLC6A4P31645 AC104819.1-201ENST00000504587 486 ntBASIC18.61■□□□□ 0.57
SLC6A4P31645 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.61■□□□□ 0.57
SLC6A4P31645 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SLC6A4P31645 Z69720.1-201ENST00000601483 472 ntBASIC18.61■□□□□ 0.57
SLC6A4P31645 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC6A4P31645 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.61■□□□□ 0.57
SLC6A4P31645 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
SLC6A4P31645 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC6A4P31645 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC6A4P31645 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC6A4P31645 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SLC6A4P31645 AL096828.2-201ENST00000567259 1965 ntBASIC18.61■□□□□ 0.57
SLC6A4P31645 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
SLC6A4P31645 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SLC6A4P31645 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC6A4P31645 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC6A4P31645 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.6■□□□□ 0.57
SLC6A4P31645 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC6A4P31645 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SLC6A4P31645 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.6■□□□□ 0.57
SLC6A4P31645 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.6■□□□□ 0.57
SLC6A4P31645 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
SLC6A4P31645 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC6A4P31645 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
SLC6A4P31645 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC6A4P31645 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC6A4P31645 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC6A4P31645 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SLC6A4P31645 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
SLC6A4P31645 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SLC6A4P31645 AC246785.2-201ENST00000432512 513 ntBASIC18.6■□□□□ 0.57
SLC6A4P31645 MTCL1P1-201ENST00000446207 792 ntBASIC18.6■□□□□ 0.57
SLC6A4P31645 NUS1P1-201ENST00000446295 882 ntBASIC18.6■□□□□ 0.57
SLC6A4P31645 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
SLC6A4P31645 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms