Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCND1P24385 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCND1P24385 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
CCND1P24385 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.34■□□□□ 0.53
CCND1P24385 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CCND1P24385 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCND1P24385 MFAP1P1-201ENST00000442257 1255 ntBASIC18.34■□□□□ 0.53
CCND1P24385 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCND1P24385 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCND1P24385 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCND1P24385 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCND1P24385 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCND1P24385 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCND1P24385 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCND1P24385 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCND1P24385 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CCND1P24385 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCND1P24385 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCND1P24385 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.34■□□□□ 0.53
CCND1P24385 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCND1P24385 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCND1P24385 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CCND1P24385 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCND1P24385 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.33■□□□□ 0.53
CCND1P24385 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
CCND1P24385 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
CCND1P24385 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.33■□□□□ 0.53
CCND1P24385 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.33■□□□□ 0.53
CCND1P24385 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
CCND1P24385 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCND1P24385 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
CCND1P24385 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CCND1P24385 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCND1P24385 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.33■□□□□ 0.53
CCND1P24385 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.33■□□□□ 0.52
CCND1P24385 CA15P1-201ENST00000481698 905 ntBASIC18.33■□□□□ 0.52
CCND1P24385 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.33■□□□□ 0.52
CCND1P24385 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
CCND1P24385 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.33■□□□□ 0.52
CCND1P24385 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCND1P24385 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCND1P24385 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.33■□□□□ 0.52
CCND1P24385 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCND1P24385 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCND1P24385 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCND1P24385 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CCND1P24385 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCND1P24385 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC18.33■□□□□ 0.52
CCND1P24385 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCND1P24385 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCND1P24385 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCND1P24385 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CCND1P24385 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCND1P24385 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CCND1P24385 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCND1P24385 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.33■□□□□ 0.52
CCND1P24385 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCND1P24385 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
CCND1P24385 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CCND1P24385 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCND1P24385 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.32■□□□□ 0.52
CCND1P24385 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.32■□□□□ 0.52
CCND1P24385 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCND1P24385 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCND1P24385 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCND1P24385 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCND1P24385 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.32■□□□□ 0.52
CCND1P24385 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCND1P24385 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CCND1P24385 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCND1P24385 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.32■□□□□ 0.52
CCND1P24385 RBM17P1-201ENST00000453646 1190 ntBASIC18.32■□□□□ 0.52
CCND1P24385 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.32■□□□□ 0.52
CCND1P24385 AC093827.2-201ENST00000512654 315 ntBASIC18.32■□□□□ 0.52
CCND1P24385 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
CCND1P24385 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.32■□□□□ 0.52
CCND1P24385 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCND1P24385 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.32■□□□□ 0.52
CCND1P24385 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCND1P24385 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCND1P24385 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCND1P24385 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCND1P24385 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCND1P24385 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCND1P24385 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCND1P24385 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCND1P24385 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.32■□□□□ 0.52
CCND1P24385 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.32■□□□□ 0.52
CCND1P24385 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CCND1P24385 AL118508.1-201ENST00000613502 2345 ntBASIC18.32■□□□□ 0.52
CCND1P24385 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CCND1P24385 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCND1P24385 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCND1P24385 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCND1P24385 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
CCND1P24385 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCND1P24385 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCND1P24385 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCND1P24385 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCND1P24385 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms